RNA–Protein interactions for RNA: ENST00000622440.1

AC089999.3-201, humanhuman

BASIC

Gene AC089999.3, Length 577 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089999.3-201ENST00000622440 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
AC089999.3-201ENST00000622440 ABCC9O60706 1549 aa14.83□□□□□ -0.04
AC089999.3-201ENST00000622440 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
AC089999.3-201ENST00000622440 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
AC089999.3-201ENST00000622440 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
AC089999.3-201ENST00000622440 NACADO15069 1562 aa13.94□□□□□ -0.18
AC089999.3-201ENST00000622440 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
AC089999.3-201ENST00000622440 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
AC089999.3-201ENST00000622440 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
AC089999.3-201ENST00000622440 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
AC089999.3-201ENST00000622440 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
AC089999.3-201ENST00000622440 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
AC089999.3-201ENST00000622440 DCAF1Q9Y4B6 1507 aa13.56□□□□□ -0.24
AC089999.3-201ENST00000622440 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
AC089999.3-201ENST00000622440 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
AC089999.3-201ENST00000622440 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
AC089999.3-201ENST00000622440 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
AC089999.3-201ENST00000622440 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
AC089999.3-201ENST00000622440 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
AC089999.3-201ENST00000622440 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
AC089999.3-201ENST00000622440 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
AC089999.3-201ENST00000622440 ATAD2BQ9ULI0 1458 aa12.88□□□□□ -0.35
AC089999.3-201ENST00000622440 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
AC089999.3-201ENST00000622440 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
AC089999.3-201ENST00000622440 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
AC089999.3-201ENST00000622440 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
AC089999.3-201ENST00000622440 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
AC089999.3-201ENST00000622440 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
AC089999.3-201ENST00000622440 CUX2O14529 1486 aa12.75□□□□□ -0.37
AC089999.3-201ENST00000622440 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
AC089999.3-201ENST00000622440 NESP48681 1621 aa12.74□□□□□ -0.37
AC089999.3-201ENST00000622440 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
AC089999.3-201ENST00000622440 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
AC089999.3-201ENST00000622440 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
AC089999.3-201ENST00000622440 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
AC089999.3-201ENST00000622440 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
AC089999.3-201ENST00000622440 CADPSQ9ULU8 1353 aa12.52□□□□□ -0.41
AC089999.3-201ENST00000622440 WIZO95785 1651 aa12.51□□□□□ -0.41
AC089999.3-201ENST00000622440 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
AC089999.3-201ENST00000622440 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
AC089999.3-201ENST00000622440 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
AC089999.3-201ENST00000622440 WDR62O43379 1518 aa12.42□□□□□ -0.42
AC089999.3-201ENST00000622440 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
AC089999.3-201ENST00000622440 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
AC089999.3-201ENST00000622440 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
AC089999.3-201ENST00000622440 CFTRP13569 1480 aa12.37□□□□□ -0.43
AC089999.3-201ENST00000622440 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
AC089999.3-201ENST00000622440 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
AC089999.3-201ENST00000622440 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
AC089999.3-201ENST00000622440 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
AC089999.3-201ENST00000622440 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
AC089999.3-201ENST00000622440 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
AC089999.3-201ENST00000622440 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
AC089999.3-201ENST00000622440 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
AC089999.3-201ENST00000622440 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
AC089999.3-201ENST00000622440 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
AC089999.3-201ENST00000622440 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
AC089999.3-201ENST00000622440 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
AC089999.3-201ENST00000622440 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.48
AC089999.3-201ENST00000622440 TARBP1Q13395 1621 aaKnown RBP12.01□□□□□ -0.49
AC089999.3-201ENST00000622440 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
AC089999.3-201ENST00000622440 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
AC089999.3-201ENST00000622440 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
AC089999.3-201ENST00000622440 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
AC089999.3-201ENST00000622440 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
AC089999.3-201ENST00000622440 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
AC089999.3-201ENST00000622440 FBLN2P98095 1184 aa11.96□□□□□ -0.49
AC089999.3-201ENST00000622440 SOGA1O94964 1423 aa11.95□□□□□ -0.5
AC089999.3-201ENST00000622440 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
AC089999.3-201ENST00000622440 CUX1P39880 1505 aa11.94□□□□□ -0.5
AC089999.3-201ENST00000622440 CHD1O14646 1710 aa11.91□□□□□ -0.5
AC089999.3-201ENST00000622440 SNAPC4Q5SXM2 1469 aa11.91□□□□□ -0.5
AC089999.3-201ENST00000622440 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
AC089999.3-201ENST00000622440 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
AC089999.3-201ENST00000622440 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
AC089999.3-201ENST00000622440 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
AC089999.3-201ENST00000622440 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
AC089999.3-201ENST00000622440 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
AC089999.3-201ENST00000622440 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
AC089999.3-201ENST00000622440 CLASP1Q7Z460 1538 aa11.83□□□□□ -0.52
AC089999.3-201ENST00000622440 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
AC089999.3-201ENST00000622440 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
AC089999.3-201ENST00000622440 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
AC089999.3-201ENST00000622440 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
AC089999.3-201ENST00000622440 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
AC089999.3-201ENST00000622440 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
AC089999.3-201ENST00000622440 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
AC089999.3-201ENST00000622440 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
AC089999.3-201ENST00000622440 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
AC089999.3-201ENST00000622440 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
AC089999.3-201ENST00000622440 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
AC089999.3-201ENST00000622440 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
AC089999.3-201ENST00000622440 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
AC089999.3-201ENST00000622440 NUP160Q12769 1436 aa11.68□□□□□ -0.54
AC089999.3-201ENST00000622440 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
AC089999.3-201ENST00000622440 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
AC089999.3-201ENST00000622440 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
AC089999.3-201ENST00000622440 SHROOM2Q13796 1616 aa11.59□□□□□ -0.55
AC089999.3-201ENST00000622440 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
AC089999.3-201ENST00000622440 PRG4Q92954 1404 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms