RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 NISCHQ9Y2I1 1504 aa41.73■■■■■ 4.27
SLC6A6-209ENST00000622176 CCDC180Q9P1Z9 1646 aa36.87■■■■□ 3.49
SLC6A6-209ENST00000622176 ABCC9O60706 1549 aa35.81■■■■□ 3.32
SLC6A6-209ENST00000622176 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
SLC6A6-209ENST00000622176 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
SLC6A6-209ENST00000622176 NACADO15069 1562 aa34.62■■■■□ 3.13
SLC6A6-209ENST00000622176 MYO15BQ96JP2 1530 aa34.57■■■■□ 3.12
SLC6A6-209ENST00000622176 DCAF1Q9Y4B6 1507 aa34.57■■■■□ 3.12
SLC6A6-209ENST00000622176 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
SLC6A6-209ENST00000622176 UNC13AQ9UPW8 1703 aa33.69■■■□□ 2.98
SLC6A6-209ENST00000622176 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
SLC6A6-209ENST00000622176 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
SLC6A6-209ENST00000622176 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
SLC6A6-209ENST00000622176 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
SLC6A6-209ENST00000622176 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
SLC6A6-209ENST00000622176 EIF4G1Q04637 1599 aaKnown RBP32.55■■■□□ 2.8
SLC6A6-209ENST00000622176 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
SLC6A6-209ENST00000622176 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
SLC6A6-209ENST00000622176 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
SLC6A6-209ENST00000622176 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
SLC6A6-209ENST00000622176 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
SLC6A6-209ENST00000622176 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
SLC6A6-209ENST00000622176 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
SLC6A6-209ENST00000622176 RSF1Q96T23 1441 aaPredicted RBP31.97■■■□□ 2.71
SLC6A6-209ENST00000622176 PEG3Q9GZU2 1588 aa31.97■■■□□ 2.71
SLC6A6-209ENST00000622176 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
SLC6A6-209ENST00000622176 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
SLC6A6-209ENST00000622176 WIZO95785 1651 aa31.8■■■□□ 2.68
SLC6A6-209ENST00000622176 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
SLC6A6-209ENST00000622176 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
SLC6A6-209ENST00000622176 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
SLC6A6-209ENST00000622176 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
SLC6A6-209ENST00000622176 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
SLC6A6-209ENST00000622176 NESP48681 1621 aa31.02■■■□□ 2.56
SLC6A6-209ENST00000622176 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
SLC6A6-209ENST00000622176 CFTRP13569 1480 aa30.95■■■□□ 2.54
SLC6A6-209ENST00000622176 ERCC6Q03468 1493 aa30.92■■■□□ 2.54
SLC6A6-209ENST00000622176 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
SLC6A6-209ENST00000622176 CUX2O14529 1486 aa30.77■■■□□ 2.52
SLC6A6-209ENST00000622176 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
SLC6A6-209ENST00000622176 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
SLC6A6-209ENST00000622176 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
SLC6A6-209ENST00000622176 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
SLC6A6-209ENST00000622176 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
SLC6A6-209ENST00000622176 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
SLC6A6-209ENST00000622176 WDR62O43379 1518 aa30.34■■■□□ 2.45
SLC6A6-209ENST00000622176 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
SLC6A6-209ENST00000622176 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
SLC6A6-209ENST00000622176 ABCC8Q09428 1581 aa30.26■■■□□ 2.43
SLC6A6-209ENST00000622176 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
SLC6A6-209ENST00000622176 DNMBPQ6XZF7 1577 aa30.2■■■□□ 2.43
SLC6A6-209ENST00000622176 CUX1P39880 1505 aa30.14■■■□□ 2.42
SLC6A6-209ENST00000622176 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
SLC6A6-209ENST00000622176 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
SLC6A6-209ENST00000622176 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
SLC6A6-209ENST00000622176 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
SLC6A6-209ENST00000622176 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
SLC6A6-209ENST00000622176 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
SLC6A6-209ENST00000622176 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
SLC6A6-209ENST00000622176 SOGA1O94964 1423 aa29.89■■■□□ 2.38
SLC6A6-209ENST00000622176 RAD54L2Q9Y4B4 1467 aa29.85■■■□□ 2.37
SLC6A6-209ENST00000622176 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
SLC6A6-209ENST00000622176 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
SLC6A6-209ENST00000622176 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
SLC6A6-209ENST00000622176 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
SLC6A6-209ENST00000622176 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
SLC6A6-209ENST00000622176 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
SLC6A6-209ENST00000622176 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.344e-7■■■■□ 26
SLC6A6-209ENST00000622176 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
SLC6A6-209ENST00000622176 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
SLC6A6-209ENST00000622176 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
SLC6A6-209ENST00000622176 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
SLC6A6-209ENST00000622176 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
SLC6A6-209ENST00000622176 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
SLC6A6-209ENST00000622176 PBRM1Q86U86 1689 aa29.38■■■□□ 2.29
SLC6A6-209ENST00000622176 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
SLC6A6-209ENST00000622176 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
SLC6A6-209ENST00000622176 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
SLC6A6-209ENST00000622176 IGF1RP08069 1367 aa29.31■■■□□ 2.28
SLC6A6-209ENST00000622176 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
SLC6A6-209ENST00000622176 RUSC2Q8N2Y8 1516 aa29.3■■■□□ 2.28
SLC6A6-209ENST00000622176 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
SLC6A6-209ENST00000622176 FHAD1B1AJZ9 1412 aa29.23■■■□□ 2.27
SLC6A6-209ENST00000622176 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
SLC6A6-209ENST00000622176 CHD1O14646 1710 aa29.2■■■□□ 2.27
SLC6A6-209ENST00000622176 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
SLC6A6-209ENST00000622176 FBLN2P98095 1184 aa29.19■■■□□ 2.26
SLC6A6-209ENST00000622176 EEA1Q15075 1411 aa29.17■■■□□ 2.26
SLC6A6-209ENST00000622176 CUL7Q14999 1698 aa29.14■■■□□ 2.26
SLC6A6-209ENST00000622176 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
SLC6A6-209ENST00000622176 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
SLC6A6-209ENST00000622176 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
SLC6A6-209ENST00000622176 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
SLC6A6-209ENST00000622176 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
SLC6A6-209ENST00000622176 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
SLC6A6-209ENST00000622176 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
SLC6A6-209ENST00000622176 PRXQ9BXM0 1461 aa29.01■■■□□ 2.23
SLC6A6-209ENST00000622176 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
SLC6A6-209ENST00000622176 NUP160Q12769 1436 aa28.98■■■□□ 2.23
SLC6A6-209ENST00000622176 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms