RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-225ENST00000622017 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
TRO-225ENST00000622017 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
TRO-225ENST00000622017 ABCC9O60706 1549 aa27.57■■■□□ 2
TRO-225ENST00000622017 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
TRO-225ENST00000622017 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
TRO-225ENST00000622017 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
TRO-225ENST00000622017 NACADO15069 1562 aa26.58■■□□□ 1.85
TRO-225ENST00000622017 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
TRO-225ENST00000622017 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
TRO-225ENST00000622017 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
TRO-225ENST00000622017 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
TRO-225ENST00000622017 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.734e-7■■□□□ 14.5
TRO-225ENST00000622017 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
TRO-225ENST00000622017 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
TRO-225ENST00000622017 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
TRO-225ENST00000622017 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
TRO-225ENST00000622017 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
TRO-225ENST00000622017 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
TRO-225ENST00000622017 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
TRO-225ENST00000622017 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
TRO-225ENST00000622017 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
TRO-225ENST00000622017 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
TRO-225ENST00000622017 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
TRO-225ENST00000622017 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
TRO-225ENST00000622017 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
TRO-225ENST00000622017 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
TRO-225ENST00000622017 WIZO95785 1651 aa24.4■■□□□ 1.5
TRO-225ENST00000622017 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
TRO-225ENST00000622017 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
TRO-225ENST00000622017 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
TRO-225ENST00000622017 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
TRO-225ENST00000622017 NESP48681 1621 aa23.88■■□□□ 1.41
TRO-225ENST00000622017 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
TRO-225ENST00000622017 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
TRO-225ENST00000622017 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
TRO-225ENST00000622017 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
TRO-225ENST00000622017 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
TRO-225ENST00000622017 CFTRP13569 1480 aa23.7■■□□□ 1.38
TRO-225ENST00000622017 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
TRO-225ENST00000622017 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
TRO-225ENST00000622017 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
TRO-225ENST00000622017 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
TRO-225ENST00000622017 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
TRO-225ENST00000622017 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
TRO-225ENST00000622017 CUX2O14529 1486 aa23.39■■□□□ 1.33
TRO-225ENST00000622017 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
TRO-225ENST00000622017 WDR62O43379 1518 aa23.3■■□□□ 1.32
TRO-225ENST00000622017 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
TRO-225ENST00000622017 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
TRO-225ENST00000622017 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
TRO-225ENST00000622017 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
TRO-225ENST00000622017 CUX1P39880 1505 aa23.06■■□□□ 1.28
TRO-225ENST00000622017 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
TRO-225ENST00000622017 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
TRO-225ENST00000622017 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
TRO-225ENST00000622017 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
TRO-225ENST00000622017 SOGA1O94964 1423 aa22.98■■□□□ 1.27
TRO-225ENST00000622017 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
TRO-225ENST00000622017 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
TRO-225ENST00000622017 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
TRO-225ENST00000622017 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
TRO-225ENST00000622017 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
TRO-225ENST00000622017 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
TRO-225ENST00000622017 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
TRO-225ENST00000622017 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRO-225ENST00000622017 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
TRO-225ENST00000622017 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
TRO-225ENST00000622017 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
TRO-225ENST00000622017 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
TRO-225ENST00000622017 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
TRO-225ENST00000622017 FBLN2P98095 1184 aa22.65■■□□□ 1.22
TRO-225ENST00000622017 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
TRO-225ENST00000622017 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TRO-225ENST00000622017 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
TRO-225ENST00000622017 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
TRO-225ENST00000622017 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
TRO-225ENST00000622017 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
TRO-225ENST00000622017 KIF27Q86VH2 1401 aa22.58■■□□□ 1.2
TRO-225ENST00000622017 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
TRO-225ENST00000622017 CHD1O14646 1710 aa22.52■■□□□ 1.2
TRO-225ENST00000622017 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
TRO-225ENST00000622017 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
TRO-225ENST00000622017 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
TRO-225ENST00000622017 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TRO-225ENST00000622017 EEA1Q15075 1411 aa22.45■■□□□ 1.18
TRO-225ENST00000622017 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
TRO-225ENST00000622017 IGF1RP08069 1367 aa22.42■■□□□ 1.18
TRO-225ENST00000622017 LOC105371045A0A1W2PR82 267 aa22.41■■□□□ 1.18
TRO-225ENST00000622017 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
TRO-225ENST00000622017 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
TRO-225ENST00000622017 CUL7Q14999 1698 aa22.36■■□□□ 1.17
TRO-225ENST00000622017 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
TRO-225ENST00000622017 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
TRO-225ENST00000622017 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
TRO-225ENST00000622017 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
TRO-225ENST00000622017 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.15
TRO-225ENST00000622017 NUP160Q12769 1436 aa22.19■■□□□ 1.14
TRO-225ENST00000622017 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
TRO-225ENST00000622017 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
TRO-225ENST00000622017 KIF21BO75037 1637 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms