RNA–Protein interactions for RNA: ENST00000621379.4

IFRD1-217, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2 BASIC

Gene IFRD1, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-217ENST00000621379 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
IFRD1-217ENST00000621379 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
IFRD1-217ENST00000621379 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.5
IFRD1-217ENST00000621379 CCDC180Q9P1Z9 1646 aa11.78□□□□□ -0.52
IFRD1-217ENST00000621379 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.63
IFRD1-217ENST00000621379 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
IFRD1-217ENST00000621379 NACADO15069 1562 aa10.98□□□□□ -0.65
IFRD1-217ENST00000621379 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.66
IFRD1-217ENST00000621379 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
IFRD1-217ENST00000621379 ABCC9O60706 1549 aa10.84□□□□□ -0.67
IFRD1-217ENST00000621379 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
IFRD1-217ENST00000621379 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
IFRD1-217ENST00000621379 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
IFRD1-217ENST00000621379 BICRAQ9NZM4 1560 aa10.41□□□□□ -0.74
IFRD1-217ENST00000621379 SCRIBQ14160 1630 aa10.26□□□□□ -0.77
IFRD1-217ENST00000621379 PEG3Q9GZU2 1588 aa10.15□□□□□ -0.78
IFRD1-217ENST00000621379 EIF4G1Q04637 1599 aaKnown RBP10.14□□□□□ -0.79
IFRD1-217ENST00000621379 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
IFRD1-217ENST00000621379 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
IFRD1-217ENST00000621379 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
IFRD1-217ENST00000621379 BAZ1AQ9NRL2 1556 aaPredicted RBP10.11□□□□□ -0.79
IFRD1-217ENST00000621379 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
IFRD1-217ENST00000621379 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
IFRD1-217ENST00000621379 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
IFRD1-217ENST00000621379 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
IFRD1-217ENST00000621379 MYT1Q01538 1121 aa10.03□□□□□ -0.8
IFRD1-217ENST00000621379 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
IFRD1-217ENST00000621379 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
IFRD1-217ENST00000621379 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
IFRD1-217ENST00000621379 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
IFRD1-217ENST00000621379 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
IFRD1-217ENST00000621379 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
IFRD1-217ENST00000621379 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
IFRD1-217ENST00000621379 MROH2BQ7Z745 1585 aa9.79□□□□□ -0.84
IFRD1-217ENST00000621379 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
IFRD1-217ENST00000621379 PRDM2Q13029 1718 aa9.78□□□□□ -0.84
IFRD1-217ENST00000621379 SENP3Q9H4L4 574 aaPredicted RBP9.77□□□□□ -0.85
IFRD1-217ENST00000621379 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
IFRD1-217ENST00000621379 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
IFRD1-217ENST00000621379 CUX2O14529 1486 aa9.68□□□□□ -0.86
IFRD1-217ENST00000621379 WIZO95785 1651 aa9.67□□□□□ -0.86
IFRD1-217ENST00000621379 PDS5BQ9NTI5 1447 aa9.65□□□□□ -0.87
IFRD1-217ENST00000621379 WDR97A6NE52 1622 aa9.63□□□□□ -0.87
IFRD1-217ENST00000621379 CFTRP13569 1480 aa9.63□□□□□ -0.87
IFRD1-217ENST00000621379 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
IFRD1-217ENST00000621379 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
IFRD1-217ENST00000621379 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
IFRD1-217ENST00000621379 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
IFRD1-217ENST00000621379 ADRA2BP18089 450 aa9.57□□□□□ -0.88
IFRD1-217ENST00000621379 THOC2Q8NI27 1593 aaKnown RBP9.56□□□□□ -0.88
IFRD1-217ENST00000621379 WDR62O43379 1518 aa9.56□□□□□ -0.88
IFRD1-217ENST00000621379 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
IFRD1-217ENST00000621379 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
IFRD1-217ENST00000621379 KCNA4P22459 653 aa9.51□□□□□ -0.89
IFRD1-217ENST00000621379 EHMT2Q96KQ7 1210 aa9.51□□□□□ -0.89
IFRD1-217ENST00000621379 CEP164Q9UPV0 1460 aa9.5□□□□□ -0.89
IFRD1-217ENST00000621379 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
IFRD1-217ENST00000621379 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
IFRD1-217ENST00000621379 APLP2Q06481 763 aa9.47□□□□□ -0.89
IFRD1-217ENST00000621379 FANCD2Q9BXW9 1451 aa9.46□□□□□ -0.89
IFRD1-217ENST00000621379 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.89
IFRD1-217ENST00000621379 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
IFRD1-217ENST00000621379 BIVM-ERCC5R4GMW8 1640 aa9.39□□□□□ -0.91
IFRD1-217ENST00000621379 PPP6R1Q9UPN7 881 aa9.39□□□□□ -0.91
IFRD1-217ENST00000621379 NESP48681 1621 aa9.37□□□□□ -0.91
IFRD1-217ENST00000621379 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
IFRD1-217ENST00000621379 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
IFRD1-217ENST00000621379 TOP2BQ02880 1626 aa9.33□□□□□ -0.92
IFRD1-217ENST00000621379 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
IFRD1-217ENST00000621379 TARBP1Q13395 1621 aaKnown RBP9.3□□□□□ -0.92
IFRD1-217ENST00000621379 ABCA10Q8WWZ4 1543 aa9.27□□□□□ -0.93
IFRD1-217ENST00000621379 CSRNP3Q8WYN3 585 aa9.25□□□□□ -0.93
IFRD1-217ENST00000621379 CUX1P39880 1505 aa9.24□□□□□ -0.93
IFRD1-217ENST00000621379 MAGI1Q96QZ7 1491 aaPredicted RBP9.24□□□□□ -0.93
IFRD1-217ENST00000621379 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
IFRD1-217ENST00000621379 ERICH3Q5RHP9 1530 aa9.23□□□□□ -0.93
IFRD1-217ENST00000621379 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
IFRD1-217ENST00000621379 WRNQ14191 1432 aaPredicted RBP eCLIP9.21□□□□□ -0.93
IFRD1-217ENST00000621379 EIF4G3O43432 1585 aaKnown RBP9.19□□□□□ -0.94
IFRD1-217ENST00000621379 CUL7Q14999 1698 aa9.19□□□□□ -0.94
IFRD1-217ENST00000621379 GRIN2BQ13224 1484 aa9.19□□□□□ -0.94
IFRD1-217ENST00000621379 FGD5Q6ZNL6 1462 aa9.19□□□□□ -0.94
IFRD1-217ENST00000621379 PBRM1Q86U86 1689 aa9.18□□□□□ -0.94
IFRD1-217ENST00000621379 SOGA1O94964 1423 aa9.17□□□□□ -0.94
IFRD1-217ENST00000621379 FOXD1Q16676 465 aa9.16□□□□□ -0.94
IFRD1-217ENST00000621379 EEA1Q15075 1411 aa9.16□□□□□ -0.94
IFRD1-217ENST00000621379 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
IFRD1-217ENST00000621379 SYNJ1O43426 1573 aa9.14□□□□□ -0.95
IFRD1-217ENST00000621379 BCL11AQ9H165 835 aa9.13□□□□□ -0.95
IFRD1-217ENST00000621379 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
IFRD1-217ENST00000621379 ADAMTS12P58397 1594 aa9.11□□□□□ -0.95
IFRD1-217ENST00000621379 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
IFRD1-217ENST00000621379 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
IFRD1-217ENST00000621379 KIF27Q86VH2 1401 aa9.08□□□□□ -0.96
IFRD1-217ENST00000621379 CLASP1Q7Z460 1538 aa9.08□□□□□ -0.96
IFRD1-217ENST00000621379 SUPT5HO00267 1087 aaKnown RBP9.07□□□□□ -0.96
IFRD1-217ENST00000621379 SHROOM2Q13796 1616 aa9.06□□□□□ -0.96
IFRD1-217ENST00000621379 NUP160Q12769 1436 aa9.05□□□□□ -0.96
IFRD1-217ENST00000621379 CHD1O14646 1710 aa9.04□□□□□ -0.96
IFRD1-217ENST00000621379 ZNF608Q9ULD9 1512 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms