RNA–Protein interactions for RNA: ENST00000621281.1

AL139260.3-204, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL139260.3, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-204ENST00000621281 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
AL139260.3-204ENST00000621281 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
AL139260.3-204ENST00000621281 ABCC9O60706 1549 aa27.59■■■□□ 2.01
AL139260.3-204ENST00000621281 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
AL139260.3-204ENST00000621281 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
AL139260.3-204ENST00000621281 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
AL139260.3-204ENST00000621281 NACADO15069 1562 aa26.12■■□□□ 1.77
AL139260.3-204ENST00000621281 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
AL139260.3-204ENST00000621281 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
AL139260.3-204ENST00000621281 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
AL139260.3-204ENST00000621281 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
AL139260.3-204ENST00000621281 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
AL139260.3-204ENST00000621281 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
AL139260.3-204ENST00000621281 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
AL139260.3-204ENST00000621281 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
AL139260.3-204ENST00000621281 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
AL139260.3-204ENST00000621281 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
AL139260.3-204ENST00000621281 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.58
AL139260.3-204ENST00000621281 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
AL139260.3-204ENST00000621281 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
AL139260.3-204ENST00000621281 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
AL139260.3-204ENST00000621281 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
AL139260.3-204ENST00000621281 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
AL139260.3-204ENST00000621281 SMARCA2P51531 1590 aa23.98■■□□□ 1.43
AL139260.3-204ENST00000621281 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
AL139260.3-204ENST00000621281 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
AL139260.3-204ENST00000621281 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
AL139260.3-204ENST00000621281 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
AL139260.3-204ENST00000621281 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
AL139260.3-204ENST00000621281 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
AL139260.3-204ENST00000621281 CUX2O14529 1486 aa23.76■■□□□ 1.39
AL139260.3-204ENST00000621281 NESP48681 1621 aa23.74■■□□□ 1.39
AL139260.3-204ENST00000621281 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
AL139260.3-204ENST00000621281 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
AL139260.3-204ENST00000621281 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
AL139260.3-204ENST00000621281 WIZO95785 1651 aa23.5■■□□□ 1.35
AL139260.3-204ENST00000621281 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
AL139260.3-204ENST00000621281 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
AL139260.3-204ENST00000621281 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
AL139260.3-204ENST00000621281 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
AL139260.3-204ENST00000621281 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
AL139260.3-204ENST00000621281 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
AL139260.3-204ENST00000621281 WDR62O43379 1518 aa23.18■■□□□ 1.3
AL139260.3-204ENST00000621281 CFTRP13569 1480 aa23.14■■□□□ 1.29
AL139260.3-204ENST00000621281 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
AL139260.3-204ENST00000621281 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
AL139260.3-204ENST00000621281 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
AL139260.3-204ENST00000621281 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
AL139260.3-204ENST00000621281 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
AL139260.3-204ENST00000621281 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
AL139260.3-204ENST00000621281 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
AL139260.3-204ENST00000621281 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
AL139260.3-204ENST00000621281 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
AL139260.3-204ENST00000621281 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
AL139260.3-204ENST00000621281 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
AL139260.3-204ENST00000621281 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
AL139260.3-204ENST00000621281 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
AL139260.3-204ENST00000621281 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
AL139260.3-204ENST00000621281 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
AL139260.3-204ENST00000621281 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
AL139260.3-204ENST00000621281 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
AL139260.3-204ENST00000621281 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.183e-7■■■■■ 30.5
AL139260.3-204ENST00000621281 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
AL139260.3-204ENST00000621281 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
AL139260.3-204ENST00000621281 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
AL139260.3-204ENST00000621281 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
AL139260.3-204ENST00000621281 CHD1O14646 1710 aa22.35■■□□□ 1.17
AL139260.3-204ENST00000621281 SOGA1O94964 1423 aa22.35■■□□□ 1.17
AL139260.3-204ENST00000621281 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
AL139260.3-204ENST00000621281 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
AL139260.3-204ENST00000621281 CUX1P39880 1505 aa22.33■■□□□ 1.17
AL139260.3-204ENST00000621281 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
AL139260.3-204ENST00000621281 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
AL139260.3-204ENST00000621281 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
AL139260.3-204ENST00000621281 FBLN2P98095 1184 aa22.23■■□□□ 1.15
AL139260.3-204ENST00000621281 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
AL139260.3-204ENST00000621281 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
AL139260.3-204ENST00000621281 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
AL139260.3-204ENST00000621281 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
AL139260.3-204ENST00000621281 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
AL139260.3-204ENST00000621281 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
AL139260.3-204ENST00000621281 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
AL139260.3-204ENST00000621281 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
AL139260.3-204ENST00000621281 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
AL139260.3-204ENST00000621281 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
AL139260.3-204ENST00000621281 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.12
AL139260.3-204ENST00000621281 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
AL139260.3-204ENST00000621281 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
AL139260.3-204ENST00000621281 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
AL139260.3-204ENST00000621281 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
AL139260.3-204ENST00000621281 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
AL139260.3-204ENST00000621281 ADAMTS12P58397 1594 aa21.89■■□□□ 1.09
AL139260.3-204ENST00000621281 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
AL139260.3-204ENST00000621281 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
AL139260.3-204ENST00000621281 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
AL139260.3-204ENST00000621281 NUP160Q12769 1436 aa21.81■■□□□ 1.08
AL139260.3-204ENST00000621281 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
AL139260.3-204ENST00000621281 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
AL139260.3-204ENST00000621281 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
AL139260.3-204ENST00000621281 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms