RNA–Protein interactions for RNA: ENST00000620941.1

SRSF3-208, Transcript of serine and arginine rich splicing factor 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SRSF3, Length 869 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-208ENST00000620941 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
SRSF3-208ENST00000620941 ABCC9O60706 1549 aa31.86■■■□□ 2.69
SRSF3-208ENST00000620941 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
SRSF3-208ENST00000620941 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
SRSF3-208ENST00000620941 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
SRSF3-208ENST00000620941 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
SRSF3-208ENST00000620941 NACADO15069 1562 aa29.59■■■□□ 2.33
SRSF3-208ENST00000620941 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
SRSF3-208ENST00000620941 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
SRSF3-208ENST00000620941 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
SRSF3-208ENST00000620941 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
SRSF3-208ENST00000620941 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
SRSF3-208ENST00000620941 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
SRSF3-208ENST00000620941 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
SRSF3-208ENST00000620941 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
SRSF3-208ENST00000620941 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
SRSF3-208ENST00000620941 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
SRSF3-208ENST00000620941 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
SRSF3-208ENST00000620941 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
SRSF3-208ENST00000620941 CUX2O14529 1486 aa27.79■■■□□ 2.04
SRSF3-208ENST00000620941 ERCC6Q03468 1493 aa27.64■■■□□ 2.02
SRSF3-208ENST00000620941 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
SRSF3-208ENST00000620941 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
SRSF3-208ENST00000620941 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
SRSF3-208ENST00000620941 NESP48681 1621 aa27.1■■□□□ 1.93
SRSF3-208ENST00000620941 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
SRSF3-208ENST00000620941 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
SRSF3-208ENST00000620941 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
SRSF3-208ENST00000620941 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
SRSF3-208ENST00000620941 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
SRSF3-208ENST00000620941 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
SRSF3-208ENST00000620941 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
SRSF3-208ENST00000620941 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
SRSF3-208ENST00000620941 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
SRSF3-208ENST00000620941 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
SRSF3-208ENST00000620941 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
SRSF3-208ENST00000620941 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
SRSF3-208ENST00000620941 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
SRSF3-208ENST00000620941 WDR62O43379 1518 aa26.43■■□□□ 1.82
SRSF3-208ENST00000620941 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SRSF3-208ENST00000620941 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
SRSF3-208ENST00000620941 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
SRSF3-208ENST00000620941 RIMBP3CA6NJZ7 1639 aa26.04■■□□□ 1.76
SRSF3-208ENST00000620941 RIMBP3BA6NNM3 1639 aa26.04■■□□□ 1.76
SRSF3-208ENST00000620941 RIMBP3Q9UFD9 1639 aa26.04■■□□□ 1.76
SRSF3-208ENST00000620941 CFTRP13569 1480 aa26.01■■□□□ 1.75
SRSF3-208ENST00000620941 TRHP20396 242 aaPredicted RBP25.98■■□□□ 1.75
SRSF3-208ENST00000620941 WIZO95785 1651 aa25.98■■□□□ 1.75
SRSF3-208ENST00000620941 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
SRSF3-208ENST00000620941 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
SRSF3-208ENST00000620941 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
SRSF3-208ENST00000620941 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
SRSF3-208ENST00000620941 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
SRSF3-208ENST00000620941 ZNF608Q9ULD9 1512 aaPredicted RBP25.77■■□□□ 1.72
SRSF3-208ENST00000620941 FBLN2P98095 1184 aa25.66■■□□□ 1.7
SRSF3-208ENST00000620941 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
SRSF3-208ENST00000620941 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
SRSF3-208ENST00000620941 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
SRSF3-208ENST00000620941 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
SRSF3-208ENST00000620941 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
SRSF3-208ENST00000620941 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
SRSF3-208ENST00000620941 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.677e-9■■■■□ 22
SRSF3-208ENST00000620941 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
SRSF3-208ENST00000620941 CHD1O14646 1710 aa25.46■■□□□ 1.67
SRSF3-208ENST00000620941 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
SRSF3-208ENST00000620941 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
SRSF3-208ENST00000620941 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
SRSF3-208ENST00000620941 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
SRSF3-208ENST00000620941 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
SRSF3-208ENST00000620941 POLA1P09884 1462 aaPredicted RBP25.26■■□□□ 1.63
SRSF3-208ENST00000620941 SOGA1O94964 1423 aa25.23■■□□□ 1.63
SRSF3-208ENST00000620941 SYNJ1O43426 1573 aa25.2■■□□□ 1.62
SRSF3-208ENST00000620941 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
SRSF3-208ENST00000620941 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
SRSF3-208ENST00000620941 CLASP1Q7Z460 1538 aa25.18■■□□□ 1.62
SRSF3-208ENST00000620941 MAGI1Q96QZ7 1491 aaPredicted RBP25.12■■□□□ 1.61
SRSF3-208ENST00000620941 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
SRSF3-208ENST00000620941 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
SRSF3-208ENST00000620941 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
SRSF3-208ENST00000620941 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
SRSF3-208ENST00000620941 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
SRSF3-208ENST00000620941 CUX1P39880 1505 aa24.81■■□□□ 1.56
SRSF3-208ENST00000620941 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
SRSF3-208ENST00000620941 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
SRSF3-208ENST00000620941 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
SRSF3-208ENST00000620941 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
SRSF3-208ENST00000620941 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
SRSF3-208ENST00000620941 NPM1P06748 294 aaKnown RBP eCLIP24.66■■□□□ 1.54
SRSF3-208ENST00000620941 FAM69CQ0P6D2 419 aa24.66■■□□□ 1.54
SRSF3-208ENST00000620941 ILDR1Q86SU0 546 aaPredicted RBP24.65■■□□□ 1.54
SRSF3-208ENST00000620941 NUP160Q12769 1436 aa24.63■■□□□ 1.53
SRSF3-208ENST00000620941 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
SRSF3-208ENST00000620941 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
SRSF3-208ENST00000620941 KDM4FA0A1W2PPD8 638 aa24.56■■□□□ 1.52
SRSF3-208ENST00000620941 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
SRSF3-208ENST00000620941 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
SRSF3-208ENST00000620941 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
SRSF3-208ENST00000620941 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
SRSF3-208ENST00000620941 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
SRSF3-208ENST00000620941 ABCC10Q5T3U5 1492 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms