RNA–Protein interactions for RNA: ENST00000620722.4

CACNA2D3-212, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-212ENST00000620722 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
CACNA2D3-212ENST00000620722 HRCP23327 699 aa11.92□□□□□ -0.5
CACNA2D3-212ENST00000620722 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
CACNA2D3-212ENST00000620722 MYO15BQ96JP2 1530 aa11.63□□□□□ -0.55
CACNA2D3-212ENST00000620722 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
CACNA2D3-212ENST00000620722 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
CACNA2D3-212ENST00000620722 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
CACNA2D3-212ENST00000620722 PCGF6Q9BYE7 350 aa11.48□□□□□ -0.57
CACNA2D3-212ENST00000620722 PPARGC1BQ86YN6 1023 aaKnown RBP11.47□□□□□ -0.57
CACNA2D3-212ENST00000620722 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
CACNA2D3-212ENST00000620722 ZCCHC6Q5VYS8 1495 aaKnown RBP11.45□□□□□ -0.58
CACNA2D3-212ENST00000620722 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
CACNA2D3-212ENST00000620722 MYT1Q01538 1121 aa11.27□□□□□ -0.61
CACNA2D3-212ENST00000620722 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
CACNA2D3-212ENST00000620722 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
CACNA2D3-212ENST00000620722 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
CACNA2D3-212ENST00000620722 ABCC9O60706 1549 aa11.17□□□□□ -0.62
CACNA2D3-212ENST00000620722 LOC105371045A0A1W2PR82 267 aa11.06□□□□□ -0.64
CACNA2D3-212ENST00000620722 DNAJC5BQ9UF47 199 aa11.03□□□□□ -0.64
CACNA2D3-212ENST00000620722 ACIN1Q9UKV3 1341 aaKnown RBP10.99□□□□□ -0.65
CACNA2D3-212ENST00000620722 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
CACNA2D3-212ENST00000620722 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
CACNA2D3-212ENST00000620722 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
CACNA2D3-212ENST00000620722 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
CACNA2D3-212ENST00000620722 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
CACNA2D3-212ENST00000620722 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
CACNA2D3-212ENST00000620722 DIEXFQ68CQ4 756 aaKnown RBP10.72□□□□□ -0.69
CACNA2D3-212ENST00000620722 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
CACNA2D3-212ENST00000620722 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.71
CACNA2D3-212ENST00000620722 WRNQ14191 1432 aaPredicted RBP eCLIP10.63□□□□□ -0.71
CACNA2D3-212ENST00000620722 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
CACNA2D3-212ENST00000620722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
CACNA2D3-212ENST00000620722 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
CACNA2D3-212ENST00000620722 EIF4G1Q04637 1599 aaKnown RBP10.59□□□□□ -0.71
CACNA2D3-212ENST00000620722 ZNF316A6NFI3 1004 aaPredicted RBP10.55□□□□□ -0.72
CACNA2D3-212ENST00000620722 NACADO15069 1562 aa10.55□□□□□ -0.72
CACNA2D3-212ENST00000620722 CLSPNQ9HAW4 1339 aa10.54□□□□□ -0.72
CACNA2D3-212ENST00000620722 FAM9AQ8IZU1 332 aaPredicted RBP10.52□□□□□ -0.73
CACNA2D3-212ENST00000620722 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
CACNA2D3-212ENST00000620722 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
CACNA2D3-212ENST00000620722 MIER1Q8N108 512 aa10.42□□□□□ -0.74
CACNA2D3-212ENST00000620722 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
CACNA2D3-212ENST00000620722 MROH2BQ7Z745 1585 aa10.4□□□□□ -0.75
CACNA2D3-212ENST00000620722 TNIKQ9UKE5 1360 aa10.4□□□□□ -0.75
CACNA2D3-212ENST00000620722 WIZO95785 1651 aa10.39□□□□□ -0.75
CACNA2D3-212ENST00000620722 ANP32EQ9BTT0 268 aa10.39□□□□□ -0.75
CACNA2D3-212ENST00000620722 YTHDC1Q96MU7 727 aaKnown RBP10.38□□□□□ -0.75
CACNA2D3-212ENST00000620722 UNC13AQ9UPW8 1703 aa10.36□□□□□ -0.75
CACNA2D3-212ENST00000620722 CUX2O14529 1486 aa10.36□□□□□ -0.75
CACNA2D3-212ENST00000620722 EEA1Q15075 1411 aa10.35□□□□□ -0.75
CACNA2D3-212ENST00000620722 BCL11AQ9H165 835 aa10.35□□□□□ -0.75
CACNA2D3-212ENST00000620722 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
CACNA2D3-212ENST00000620722 CECR2Q9BXF3 1484 aa10.34□□□□□ -0.75
CACNA2D3-212ENST00000620722 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
CACNA2D3-212ENST00000620722 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
CACNA2D3-212ENST00000620722 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
CACNA2D3-212ENST00000620722 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
CACNA2D3-212ENST00000620722 ABCC8Q09428 1581 aa10.28□□□□□ -0.76
CACNA2D3-212ENST00000620722 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
CACNA2D3-212ENST00000620722 CC2D2AQ9P2K1 1620 aa10.27□□□□□ -0.77
CACNA2D3-212ENST00000620722 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
CACNA2D3-212ENST00000620722 KIF21BO75037 1637 aa10.25□□□□□ -0.77
CACNA2D3-212ENST00000620722 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
CACNA2D3-212ENST00000620722 SOGA1O94964 1423 aa10.22□□□□□ -0.77
CACNA2D3-212ENST00000620722 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
CACNA2D3-212ENST00000620722 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
CACNA2D3-212ENST00000620722 BAZ1BQ9UIG0 1483 aaKnown RBP10.17□□□□□ -0.78
CACNA2D3-212ENST00000620722 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
CACNA2D3-212ENST00000620722 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
CACNA2D3-212ENST00000620722 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
CACNA2D3-212ENST00000620722 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
CACNA2D3-212ENST00000620722 CLIP1P30622 1438 aa10.13□□□□□ -0.79
CACNA2D3-212ENST00000620722 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
CACNA2D3-212ENST00000620722 PABPN1Q86U42 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
CACNA2D3-212ENST00000620722 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
CACNA2D3-212ENST00000620722 RBM19Q9Y4C8 960 aaKnown RBP10.05□□□□□ -0.8
CACNA2D3-212ENST00000620722 RRBP1Q9P2E9 1410 aaKnown RBP10.04□□□□□ -0.8
CACNA2D3-212ENST00000620722 SYNJ1O43426 1573 aa10.04□□□□□ -0.8
CACNA2D3-212ENST00000620722 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
CACNA2D3-212ENST00000620722 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
CACNA2D3-212ENST00000620722 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
CACNA2D3-212ENST00000620722 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
CACNA2D3-212ENST00000620722 MAPKBP1O60336 1514 aa9.98□□□□□ -0.81
CACNA2D3-212ENST00000620722 FKBP8Q14318 412 aa9.98□□□□□ -0.81
CACNA2D3-212ENST00000620722 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
CACNA2D3-212ENST00000620722 MSH5O43196 834 aa9.97□□□□□ -0.81
CACNA2D3-212ENST00000620722 ARAP1Q96P48 1450 aa9.96□□□□□ -0.81
CACNA2D3-212ENST00000620722 APLP2Q06481 763 aa9.95□□□□□ -0.82
CACNA2D3-212ENST00000620722 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
CACNA2D3-212ENST00000620722 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
CACNA2D3-212ENST00000620722 CCER2I3L3R5 266 aa9.94□□□□□ -0.82
CACNA2D3-212ENST00000620722 NEFLP07196 543 aa9.92□□□□□ -0.82
CACNA2D3-212ENST00000620722 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CACNA2D3-212ENST00000620722 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
CACNA2D3-212ENST00000620722 TOP2BQ02880 1626 aa9.92□□□□□ -0.82
CACNA2D3-212ENST00000620722 WDR97A6NE52 1622 aa9.91□□□□□ -0.82
CACNA2D3-212ENST00000620722 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
CACNA2D3-212ENST00000620722 PRXQ9BXM0 1461 aa9.89□□□□□ -0.83
CACNA2D3-212ENST00000620722 CCNB3Q8WWL7 1395 aa9.88□□□□□ -0.83
CACNA2D3-212ENST00000620722 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms