RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
PCGF3-213ENST00000620529 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
PCGF3-213ENST00000620529 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
PCGF3-213ENST00000620529 ABCC9O60706 1549 aa31.33■■■□□ 2.61
PCGF3-213ENST00000620529 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
PCGF3-213ENST00000620529 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
PCGF3-213ENST00000620529 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
PCGF3-213ENST00000620529 NACADO15069 1562 aa30.81■■■□□ 2.52
PCGF3-213ENST00000620529 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
PCGF3-213ENST00000620529 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
PCGF3-213ENST00000620529 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
PCGF3-213ENST00000620529 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
PCGF3-213ENST00000620529 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
PCGF3-213ENST00000620529 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.311e-6■■■■□ 24.2
PCGF3-213ENST00000620529 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
PCGF3-213ENST00000620529 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
PCGF3-213ENST00000620529 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
PCGF3-213ENST00000620529 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
PCGF3-213ENST00000620529 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
PCGF3-213ENST00000620529 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
PCGF3-213ENST00000620529 WIZO95785 1651 aa28.96■■■□□ 2.23
PCGF3-213ENST00000620529 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
PCGF3-213ENST00000620529 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
PCGF3-213ENST00000620529 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
PCGF3-213ENST00000620529 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
PCGF3-213ENST00000620529 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
PCGF3-213ENST00000620529 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
PCGF3-213ENST00000620529 HMGXB3Q12766 1538 aa28.39■■■□□ 2.13
PCGF3-213ENST00000620529 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
PCGF3-213ENST00000620529 CC2D2AQ9P2K1 1620 aa28.38■■■□□ 2.13
PCGF3-213ENST00000620529 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
PCGF3-213ENST00000620529 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
PCGF3-213ENST00000620529 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
PCGF3-213ENST00000620529 CFTRP13569 1480 aa27.72■■■□□ 2.03
PCGF3-213ENST00000620529 PRDM2Q13029 1718 aa27.7■■■□□ 2.03
PCGF3-213ENST00000620529 ABCC8Q09428 1581 aa27.7■■■□□ 2.02
PCGF3-213ENST00000620529 CADPSQ9ULU8 1353 aa27.66■■■□□ 2.02
PCGF3-213ENST00000620529 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
PCGF3-213ENST00000620529 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 2
PCGF3-213ENST00000620529 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
PCGF3-213ENST00000620529 NESP48681 1621 aa27.45■■□□□ 1.98
PCGF3-213ENST00000620529 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
PCGF3-213ENST00000620529 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
PCGF3-213ENST00000620529 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
PCGF3-213ENST00000620529 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
PCGF3-213ENST00000620529 CUX1P39880 1505 aa27.28■■□□□ 1.96
PCGF3-213ENST00000620529 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
PCGF3-213ENST00000620529 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
PCGF3-213ENST00000620529 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
PCGF3-213ENST00000620529 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
PCGF3-213ENST00000620529 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
PCGF3-213ENST00000620529 EEA1Q15075 1411 aa27.12■■□□□ 1.93
PCGF3-213ENST00000620529 SOGA1O94964 1423 aa27.11■■□□□ 1.93
PCGF3-213ENST00000620529 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
PCGF3-213ENST00000620529 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
PCGF3-213ENST00000620529 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
PCGF3-213ENST00000620529 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.91
PCGF3-213ENST00000620529 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
PCGF3-213ENST00000620529 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
PCGF3-213ENST00000620529 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
PCGF3-213ENST00000620529 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
PCGF3-213ENST00000620529 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
PCGF3-213ENST00000620529 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
PCGF3-213ENST00000620529 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
PCGF3-213ENST00000620529 CUX2O14529 1486 aa26.83■■□□□ 1.89
PCGF3-213ENST00000620529 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
PCGF3-213ENST00000620529 WDR62O43379 1518 aa26.79■■□□□ 1.88
PCGF3-213ENST00000620529 ABCA10Q8WWZ4 1543 aa26.78■■□□□ 1.88
PCGF3-213ENST00000620529 KIF21BO75037 1637 aa26.77■■□□□ 1.88
PCGF3-213ENST00000620529 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
PCGF3-213ENST00000620529 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
PCGF3-213ENST00000620529 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
PCGF3-213ENST00000620529 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
PCGF3-213ENST00000620529 PRXQ9BXM0 1461 aa26.62■■□□□ 1.85
PCGF3-213ENST00000620529 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
PCGF3-213ENST00000620529 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
PCGF3-213ENST00000620529 ABCA5Q8WWZ7 1642 aa26.6■■□□□ 1.85
PCGF3-213ENST00000620529 RAPGEF2Q9Y4G8 1499 aa26.59■■□□□ 1.85
PCGF3-213ENST00000620529 IGF1RP08069 1367 aa26.59■■□□□ 1.85
PCGF3-213ENST00000620529 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
PCGF3-213ENST00000620529 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
PCGF3-213ENST00000620529 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
PCGF3-213ENST00000620529 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
PCGF3-213ENST00000620529 CUL7Q14999 1698 aa26.52■■□□□ 1.84
PCGF3-213ENST00000620529 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
PCGF3-213ENST00000620529 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
PCGF3-213ENST00000620529 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
PCGF3-213ENST00000620529 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
PCGF3-213ENST00000620529 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
PCGF3-213ENST00000620529 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
PCGF3-213ENST00000620529 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
PCGF3-213ENST00000620529 CLIP1P30622 1438 aa26.28■■□□□ 1.8
PCGF3-213ENST00000620529 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
PCGF3-213ENST00000620529 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
PCGF3-213ENST00000620529 CTTNBP2Q8WZ74 1663 aa26.23■■□□□ 1.79
PCGF3-213ENST00000620529 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
PCGF3-213ENST00000620529 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
PCGF3-213ENST00000620529 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
PCGF3-213ENST00000620529 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
PCGF3-213ENST00000620529 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms