RNA–Protein interactions for RNA: ENST00000620084.4

HVCN1-209, Transcript of hydrogen voltage gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HVCN1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-209ENST00000620084 AEBP2Q6ZN18 517 aaPredicted RBP32.47■■■□□ 2.79
HVCN1-209ENST00000620084 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.56
HVCN1-209ENST00000620084 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
HVCN1-209ENST00000620084 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
HVCN1-209ENST00000620084 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
HVCN1-209ENST00000620084 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
HVCN1-209ENST00000620084 ABCC9O60706 1549 aa25.85■■□□□ 1.73
HVCN1-209ENST00000620084 FOXD1Q16676 465 aa25.8■■□□□ 1.72
HVCN1-209ENST00000620084 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
HVCN1-209ENST00000620084 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
HVCN1-209ENST00000620084 NACADO15069 1562 aa24.67■■□□□ 1.54
HVCN1-209ENST00000620084 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
HVCN1-209ENST00000620084 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
HVCN1-209ENST00000620084 UNC13AQ9UPW8 1703 aa24.33■■□□□ 1.49
HVCN1-209ENST00000620084 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
HVCN1-209ENST00000620084 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.47
HVCN1-209ENST00000620084 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
HVCN1-209ENST00000620084 PIAS4Q8N2W9 510 aaPredicted RBP24.16■■□□□ 1.46
HVCN1-209ENST00000620084 ADRA2BP18089 450 aa24.16■■□□□ 1.46
HVCN1-209ENST00000620084 MSH5O43196 834 aa24.15■■□□□ 1.46
HVCN1-209ENST00000620084 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
HVCN1-209ENST00000620084 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
HVCN1-209ENST00000620084 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
HVCN1-209ENST00000620084 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
HVCN1-209ENST00000620084 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
HVCN1-209ENST00000620084 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
HVCN1-209ENST00000620084 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
HVCN1-209ENST00000620084 POTEDQ86YR6 584 aa23.28■■□□□ 1.32
HVCN1-209ENST00000620084 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
HVCN1-209ENST00000620084 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
HVCN1-209ENST00000620084 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
HVCN1-209ENST00000620084 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
HVCN1-209ENST00000620084 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
HVCN1-209ENST00000620084 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
HVCN1-209ENST00000620084 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
HVCN1-209ENST00000620084 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
HVCN1-209ENST00000620084 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
HVCN1-209ENST00000620084 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
HVCN1-209ENST00000620084 NESP48681 1621 aa22.29■■□□□ 1.16
HVCN1-209ENST00000620084 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
HVCN1-209ENST00000620084 WIZO95785 1651 aa22.27■■□□□ 1.16
HVCN1-209ENST00000620084 CUX2O14529 1486 aa22.25■■□□□ 1.15
HVCN1-209ENST00000620084 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
HVCN1-209ENST00000620084 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
HVCN1-209ENST00000620084 MAPK8IP2Q13387 824 aaPredicted RBP22.13■■□□□ 1.13
HVCN1-209ENST00000620084 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
HVCN1-209ENST00000620084 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
HVCN1-209ENST00000620084 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
HVCN1-209ENST00000620084 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
HVCN1-209ENST00000620084 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
HVCN1-209ENST00000620084 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
HVCN1-209ENST00000620084 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
HVCN1-209ENST00000620084 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.09
HVCN1-209ENST00000620084 CFTRP13569 1480 aa21.85■■□□□ 1.09
HVCN1-209ENST00000620084 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
HVCN1-209ENST00000620084 WDR62O43379 1518 aa21.83■■□□□ 1.09
HVCN1-209ENST00000620084 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
HVCN1-209ENST00000620084 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
HVCN1-209ENST00000620084 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
HVCN1-209ENST00000620084 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
HVCN1-209ENST00000620084 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
HVCN1-209ENST00000620084 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
HVCN1-209ENST00000620084 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
HVCN1-209ENST00000620084 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
HVCN1-209ENST00000620084 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
HVCN1-209ENST00000620084 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
HVCN1-209ENST00000620084 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
HVCN1-209ENST00000620084 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
HVCN1-209ENST00000620084 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
HVCN1-209ENST00000620084 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
HVCN1-209ENST00000620084 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
HVCN1-209ENST00000620084 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
HVCN1-209ENST00000620084 RNF216Q9NWF9 866 aaPredicted RBP21.14■□□□□ 0.98
HVCN1-209ENST00000620084 CUX1P39880 1505 aa21.14■□□□□ 0.98
HVCN1-209ENST00000620084 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
HVCN1-209ENST00000620084 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
HVCN1-209ENST00000620084 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
HVCN1-209ENST00000620084 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
HVCN1-209ENST00000620084 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
HVCN1-209ENST00000620084 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.97
HVCN1-209ENST00000620084 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
HVCN1-209ENST00000620084 CHD1O14646 1710 aa21.09■□□□□ 0.97
HVCN1-209ENST00000620084 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
HVCN1-209ENST00000620084 SOGA1O94964 1423 aa21.06■□□□□ 0.96
HVCN1-209ENST00000620084 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
HVCN1-209ENST00000620084 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
HVCN1-209ENST00000620084 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
HVCN1-209ENST00000620084 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
HVCN1-209ENST00000620084 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
HVCN1-209ENST00000620084 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
HVCN1-209ENST00000620084 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
HVCN1-209ENST00000620084 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
HVCN1-209ENST00000620084 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
HVCN1-209ENST00000620084 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
HVCN1-209ENST00000620084 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
HVCN1-209ENST00000620084 GRIN2BQ13224 1484 aa20.89■□□□□ 0.94
HVCN1-209ENST00000620084 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
HVCN1-209ENST00000620084 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
HVCN1-209ENST00000620084 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
HVCN1-209ENST00000620084 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms