RNA–Protein interactions for RNA: ENST00000620046.4

NCAM1-227, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-227ENST00000620046 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
NCAM1-227ENST00000620046 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
NCAM1-227ENST00000620046 ABCC9O60706 1549 aa20.83■□□□□ 0.93
NCAM1-227ENST00000620046 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
NCAM1-227ENST00000620046 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
NCAM1-227ENST00000620046 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
NCAM1-227ENST00000620046 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
NCAM1-227ENST00000620046 NACADO15069 1562 aa20.3■□□□□ 0.84
NCAM1-227ENST00000620046 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
NCAM1-227ENST00000620046 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
NCAM1-227ENST00000620046 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
NCAM1-227ENST00000620046 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
NCAM1-227ENST00000620046 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
NCAM1-227ENST00000620046 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
NCAM1-227ENST00000620046 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
NCAM1-227ENST00000620046 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
NCAM1-227ENST00000620046 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
NCAM1-227ENST00000620046 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
NCAM1-227ENST00000620046 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
NCAM1-227ENST00000620046 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
NCAM1-227ENST00000620046 WIZO95785 1651 aa19.04■□□□□ 0.64
NCAM1-227ENST00000620046 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
NCAM1-227ENST00000620046 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
NCAM1-227ENST00000620046 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
NCAM1-227ENST00000620046 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
NCAM1-227ENST00000620046 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
NCAM1-227ENST00000620046 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
NCAM1-227ENST00000620046 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
NCAM1-227ENST00000620046 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
NCAM1-227ENST00000620046 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
NCAM1-227ENST00000620046 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
NCAM1-227ENST00000620046 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
NCAM1-227ENST00000620046 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
NCAM1-227ENST00000620046 CFTRP13569 1480 aa18.21■□□□□ 0.51
NCAM1-227ENST00000620046 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
NCAM1-227ENST00000620046 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
NCAM1-227ENST00000620046 NESP48681 1621 aa18.16■□□□□ 0.5
NCAM1-227ENST00000620046 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
NCAM1-227ENST00000620046 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
NCAM1-227ENST00000620046 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
NCAM1-227ENST00000620046 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
NCAM1-227ENST00000620046 SYNJ1O43426 1573 aa18■□□□□ 0.47
NCAM1-227ENST00000620046 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
NCAM1-227ENST00000620046 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
NCAM1-227ENST00000620046 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
NCAM1-227ENST00000620046 CUX2O14529 1486 aa17.94■□□□□ 0.46
NCAM1-227ENST00000620046 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
NCAM1-227ENST00000620046 CUX1P39880 1505 aa17.93■□□□□ 0.46
NCAM1-227ENST00000620046 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
NCAM1-227ENST00000620046 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
NCAM1-227ENST00000620046 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
NCAM1-227ENST00000620046 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
NCAM1-227ENST00000620046 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
NCAM1-227ENST00000620046 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
NCAM1-227ENST00000620046 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
NCAM1-227ENST00000620046 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
NCAM1-227ENST00000620046 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
NCAM1-227ENST00000620046 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
NCAM1-227ENST00000620046 WDR62O43379 1518 aa17.72■□□□□ 0.43
NCAM1-227ENST00000620046 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
NCAM1-227ENST00000620046 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
NCAM1-227ENST00000620046 SOGA1O94964 1423 aa17.66■□□□□ 0.42
NCAM1-227ENST00000620046 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
NCAM1-227ENST00000620046 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
NCAM1-227ENST00000620046 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
NCAM1-227ENST00000620046 FAM9AQ8IZU1 332 aaPredicted RBP17.58■□□□□ 0.4
NCAM1-227ENST00000620046 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
NCAM1-227ENST00000620046 EEA1Q15075 1411 aa17.55■□□□□ 0.4
NCAM1-227ENST00000620046 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
NCAM1-227ENST00000620046 KIF27Q86VH2 1401 aa17.51■□□□□ 0.39
NCAM1-227ENST00000620046 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
NCAM1-227ENST00000620046 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
NCAM1-227ENST00000620046 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
NCAM1-227ENST00000620046 KIF21BO75037 1637 aa17.44■□□□□ 0.38
NCAM1-227ENST00000620046 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
NCAM1-227ENST00000620046 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
NCAM1-227ENST00000620046 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
NCAM1-227ENST00000620046 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
NCAM1-227ENST00000620046 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
NCAM1-227ENST00000620046 CUL7Q14999 1698 aa17.39■□□□□ 0.37
NCAM1-227ENST00000620046 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.37
NCAM1-227ENST00000620046 IGF1RP08069 1367 aa17.38■□□□□ 0.37
NCAM1-227ENST00000620046 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
NCAM1-227ENST00000620046 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
NCAM1-227ENST00000620046 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
NCAM1-227ENST00000620046 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
NCAM1-227ENST00000620046 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
NCAM1-227ENST00000620046 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
NCAM1-227ENST00000620046 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
NCAM1-227ENST00000620046 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
NCAM1-227ENST00000620046 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
NCAM1-227ENST00000620046 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
NCAM1-227ENST00000620046 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
NCAM1-227ENST00000620046 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
NCAM1-227ENST00000620046 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
NCAM1-227ENST00000620046 CHD1O14646 1710 aa17.18■□□□□ 0.34
NCAM1-227ENST00000620046 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
NCAM1-227ENST00000620046 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
NCAM1-227ENST00000620046 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
NCAM1-227ENST00000620046 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms