RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
TP53-225ENST00000619485 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
TP53-225ENST00000619485 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TP53-225ENST00000619485 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
TP53-225ENST00000619485 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
TP53-225ENST00000619485 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
TP53-225ENST00000619485 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
TP53-225ENST00000619485 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
TP53-225ENST00000619485 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
TP53-225ENST00000619485 ABCC9O60706 1549 aa17.82■□□□□ 0.44
TP53-225ENST00000619485 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
TP53-225ENST00000619485 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
TP53-225ENST00000619485 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
TP53-225ENST00000619485 NACADO15069 1562 aa17.28■□□□□ 0.36
TP53-225ENST00000619485 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
TP53-225ENST00000619485 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
TP53-225ENST00000619485 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
TP53-225ENST00000619485 HRCP23327 699 aa17.11■□□□□ 0.33
TP53-225ENST00000619485 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
TP53-225ENST00000619485 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
TP53-225ENST00000619485 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
TP53-225ENST00000619485 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
TP53-225ENST00000619485 WIZO95785 1651 aa16.96■□□□□ 0.31
TP53-225ENST00000619485 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
TP53-225ENST00000619485 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
TP53-225ENST00000619485 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
TP53-225ENST00000619485 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
TP53-225ENST00000619485 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
TP53-225ENST00000619485 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
TP53-225ENST00000619485 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
TP53-225ENST00000619485 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.25
TP53-225ENST00000619485 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
TP53-225ENST00000619485 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
TP53-225ENST00000619485 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
TP53-225ENST00000619485 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
TP53-225ENST00000619485 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
TP53-225ENST00000619485 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
TP53-225ENST00000619485 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
TP53-225ENST00000619485 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
TP53-225ENST00000619485 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
TP53-225ENST00000619485 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
TP53-225ENST00000619485 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
TP53-225ENST00000619485 KCNA4P22459 653 aa16.24■□□□□ 0.19
TP53-225ENST00000619485 ZEB1P37275 1124 aaPredicted RBP16.23■□□□□ 0.19
TP53-225ENST00000619485 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
TP53-225ENST00000619485 SOGA1O94964 1423 aa16.2■□□□□ 0.18
TP53-225ENST00000619485 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
TP53-225ENST00000619485 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
TP53-225ENST00000619485 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
TP53-225ENST00000619485 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
TP53-225ENST00000619485 MYT1Q01538 1121 aa16.01■□□□□ 0.15
TP53-225ENST00000619485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
TP53-225ENST00000619485 ADRA2BP18089 450 aa16■□□□□ 0.15
TP53-225ENST00000619485 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
TP53-225ENST00000619485 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
TP53-225ENST00000619485 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
TP53-225ENST00000619485 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
TP53-225ENST00000619485 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.14
TP53-225ENST00000619485 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
TP53-225ENST00000619485 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
TP53-225ENST00000619485 CUX1P39880 1505 aa15.87■□□□□ 0.13
TP53-225ENST00000619485 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
TP53-225ENST00000619485 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
TP53-225ENST00000619485 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
TP53-225ENST00000619485 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
TP53-225ENST00000619485 CFTRP13569 1480 aa15.83■□□□□ 0.12
TP53-225ENST00000619485 NESP48681 1621 aa15.82■□□□□ 0.12
TP53-225ENST00000619485 SENP3Q9H4L4 574 aaPredicted RBP15.82■□□□□ 0.12
TP53-225ENST00000619485 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
TP53-225ENST00000619485 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
TP53-225ENST00000619485 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
TP53-225ENST00000619485 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
TP53-225ENST00000619485 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
TP53-225ENST00000619485 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
TP53-225ENST00000619485 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
TP53-225ENST00000619485 EEA1Q15075 1411 aa15.71■□□□□ 0.11
TP53-225ENST00000619485 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
TP53-225ENST00000619485 KIF21BO75037 1637 aa15.67■□□□□ 0.1
TP53-225ENST00000619485 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
TP53-225ENST00000619485 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
TP53-225ENST00000619485 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
TP53-225ENST00000619485 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
TP53-225ENST00000619485 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
TP53-225ENST00000619485 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
TP53-225ENST00000619485 CLIP1P30622 1438 aa15.6■□□□□ 0.09
TP53-225ENST00000619485 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
TP53-225ENST00000619485 CUX2O14529 1486 aa15.59■□□□□ 0.09
TP53-225ENST00000619485 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
TP53-225ENST00000619485 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
TP53-225ENST00000619485 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
TP53-225ENST00000619485 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
TP53-225ENST00000619485 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
TP53-225ENST00000619485 IGF1RP08069 1367 aa15.5■□□□□ 0.07
TP53-225ENST00000619485 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
TP53-225ENST00000619485 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
TP53-225ENST00000619485 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
TP53-225ENST00000619485 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
TP53-225ENST00000619485 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
TP53-225ENST00000619485 ZNF316A6NFI3 1004 aaPredicted RBP15.48■□□□□ 0.07
TP53-225ENST00000619485 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms