RNA–Protein interactions for RNA: ENST00000619456.4

AGAP1-213, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5 BASIC

Gene AGAP1, Length 1,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-213ENST00000619456 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
AGAP1-213ENST00000619456 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
AGAP1-213ENST00000619456 ABCC9O60706 1549 aa32.43■■■□□ 2.78
AGAP1-213ENST00000619456 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
AGAP1-213ENST00000619456 NACADO15069 1562 aa31.33■■■□□ 2.61
AGAP1-213ENST00000619456 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
AGAP1-213ENST00000619456 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
AGAP1-213ENST00000619456 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
AGAP1-213ENST00000619456 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
AGAP1-213ENST00000619456 UNC13AQ9UPW8 1703 aa30.55■■■□□ 2.48
AGAP1-213ENST00000619456 SCRIBQ14160 1630 aa30.31■■■□□ 2.44
AGAP1-213ENST00000619456 PABPN1Q86U42 306 aaKnown RBP eCLIP30.3■■■□□ 2.44
AGAP1-213ENST00000619456 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.43
AGAP1-213ENST00000619456 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
AGAP1-213ENST00000619456 DNAJC5BQ9UF47 199 aa29.62■■■□□ 2.33
AGAP1-213ENST00000619456 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
AGAP1-213ENST00000619456 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
AGAP1-213ENST00000619456 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
AGAP1-213ENST00000619456 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
AGAP1-213ENST00000619456 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
AGAP1-213ENST00000619456 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
AGAP1-213ENST00000619456 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
AGAP1-213ENST00000619456 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
AGAP1-213ENST00000619456 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
AGAP1-213ENST00000619456 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
AGAP1-213ENST00000619456 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
AGAP1-213ENST00000619456 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
AGAP1-213ENST00000619456 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
AGAP1-213ENST00000619456 WIZO95785 1651 aa28.5■■■□□ 2.15
AGAP1-213ENST00000619456 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
AGAP1-213ENST00000619456 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
AGAP1-213ENST00000619456 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
AGAP1-213ENST00000619456 NESP48681 1621 aa28.04■■■□□ 2.08
AGAP1-213ENST00000619456 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
AGAP1-213ENST00000619456 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
AGAP1-213ENST00000619456 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.05
AGAP1-213ENST00000619456 CFTRP13569 1480 aa27.86■■■□□ 2.05
AGAP1-213ENST00000619456 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
AGAP1-213ENST00000619456 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
AGAP1-213ENST00000619456 CUX2O14529 1486 aa27.75■■■□□ 2.03
AGAP1-213ENST00000619456 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
AGAP1-213ENST00000619456 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
AGAP1-213ENST00000619456 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
AGAP1-213ENST00000619456 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
AGAP1-213ENST00000619456 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
AGAP1-213ENST00000619456 WDR62O43379 1518 aa27.5■■□□□ 1.99
AGAP1-213ENST00000619456 ABCC8Q09428 1581 aa27.38■■□□□ 1.97
AGAP1-213ENST00000619456 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
AGAP1-213ENST00000619456 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
AGAP1-213ENST00000619456 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
AGAP1-213ENST00000619456 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
AGAP1-213ENST00000619456 CUX1P39880 1505 aa27.02■■□□□ 1.92
AGAP1-213ENST00000619456 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
AGAP1-213ENST00000619456 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
AGAP1-213ENST00000619456 SOGA1O94964 1423 aa26.94■■□□□ 1.9
AGAP1-213ENST00000619456 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
AGAP1-213ENST00000619456 TARBP1Q13395 1621 aaKnown RBP26.93■■□□□ 1.9
AGAP1-213ENST00000619456 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
AGAP1-213ENST00000619456 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
AGAP1-213ENST00000619456 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
AGAP1-213ENST00000619456 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
AGAP1-213ENST00000619456 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
AGAP1-213ENST00000619456 EIF4G3O43432 1585 aaKnown RBP26.81■■□□□ 1.88
AGAP1-213ENST00000619456 SYNJ1O43426 1573 aa26.79■■□□□ 1.88
AGAP1-213ENST00000619456 DNAJC5Q9H3Z4 198 aa26.78■■□□□ 1.88
AGAP1-213ENST00000619456 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.877e-6■■□□□ 12.2
AGAP1-213ENST00000619456 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
AGAP1-213ENST00000619456 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
AGAP1-213ENST00000619456 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
AGAP1-213ENST00000619456 GAPVD1Q14C86 1478 aa26.63■■□□□ 1.85
AGAP1-213ENST00000619456 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
AGAP1-213ENST00000619456 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
AGAP1-213ENST00000619456 MAGI1Q96QZ7 1491 aaPredicted RBP26.57■■□□□ 1.84
AGAP1-213ENST00000619456 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
AGAP1-213ENST00000619456 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
AGAP1-213ENST00000619456 FBLN2P98095 1184 aa26.5■■□□□ 1.83
AGAP1-213ENST00000619456 CHD1O14646 1710 aa26.48■■□□□ 1.83
AGAP1-213ENST00000619456 CHMP7Q8WUX9 453 aaPredicted RBP26.47■■□□□ 1.83
AGAP1-213ENST00000619456 SYNJ2O15056 1496 aa26.44■■□□□ 1.82
AGAP1-213ENST00000619456 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
AGAP1-213ENST00000619456 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
AGAP1-213ENST00000619456 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
AGAP1-213ENST00000619456 FHAD1B1AJZ9 1412 aa26.34■■□□□ 1.81
AGAP1-213ENST00000619456 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
AGAP1-213ENST00000619456 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
AGAP1-213ENST00000619456 CUL7Q14999 1698 aa26.23■■□□□ 1.79
AGAP1-213ENST00000619456 IGF1RP08069 1367 aa26.22■■□□□ 1.79
AGAP1-213ENST00000619456 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
AGAP1-213ENST00000619456 NUP160Q12769 1436 aa26.13■■□□□ 1.77
AGAP1-213ENST00000619456 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
AGAP1-213ENST00000619456 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
AGAP1-213ENST00000619456 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
AGAP1-213ENST00000619456 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
AGAP1-213ENST00000619456 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
AGAP1-213ENST00000619456 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
AGAP1-213ENST00000619456 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
AGAP1-213ENST00000619456 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
AGAP1-213ENST00000619456 EEA1Q15075 1411 aa25.99■■□□□ 1.75
AGAP1-213ENST00000619456 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
AGAP1-213ENST00000619456 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms