RNA–Protein interactions for RNA: ENST00000619426.4

PSMB3-211, Transcript of proteasome subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB3, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-211ENST00000619426 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
PSMB3-211ENST00000619426 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
PSMB3-211ENST00000619426 ABCC9O60706 1549 aa26.29■■□□□ 1.8
PSMB3-211ENST00000619426 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
PSMB3-211ENST00000619426 NACADO15069 1562 aa24.9■■□□□ 1.58
PSMB3-211ENST00000619426 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
PSMB3-211ENST00000619426 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
PSMB3-211ENST00000619426 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
PSMB3-211ENST00000619426 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
PSMB3-211ENST00000619426 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
PSMB3-211ENST00000619426 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
PSMB3-211ENST00000619426 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
PSMB3-211ENST00000619426 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
PSMB3-211ENST00000619426 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
PSMB3-211ENST00000619426 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
PSMB3-211ENST00000619426 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
PSMB3-211ENST00000619426 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
PSMB3-211ENST00000619426 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
PSMB3-211ENST00000619426 SMARCA4P51532 1647 aa23■■□□□ 1.27
PSMB3-211ENST00000619426 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
PSMB3-211ENST00000619426 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
PSMB3-211ENST00000619426 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
PSMB3-211ENST00000619426 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
PSMB3-211ENST00000619426 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
PSMB3-211ENST00000619426 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
PSMB3-211ENST00000619426 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
PSMB3-211ENST00000619426 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
PSMB3-211ENST00000619426 NESP48681 1621 aa22.67■■□□□ 1.22
PSMB3-211ENST00000619426 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
PSMB3-211ENST00000619426 CUX2O14529 1486 aa22.55■■□□□ 1.2
PSMB3-211ENST00000619426 WIZO95785 1651 aa22.53■■□□□ 1.2
PSMB3-211ENST00000619426 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
PSMB3-211ENST00000619426 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
PSMB3-211ENST00000619426 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
PSMB3-211ENST00000619426 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
PSMB3-211ENST00000619426 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
PSMB3-211ENST00000619426 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
PSMB3-211ENST00000619426 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
PSMB3-211ENST00000619426 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
PSMB3-211ENST00000619426 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
PSMB3-211ENST00000619426 WDR62O43379 1518 aa22.1■■□□□ 1.13
PSMB3-211ENST00000619426 CFTRP13569 1480 aa22.08■■□□□ 1.12
PSMB3-211ENST00000619426 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
PSMB3-211ENST00000619426 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
PSMB3-211ENST00000619426 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
PSMB3-211ENST00000619426 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
PSMB3-211ENST00000619426 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
PSMB3-211ENST00000619426 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
PSMB3-211ENST00000619426 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
PSMB3-211ENST00000619426 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
PSMB3-211ENST00000619426 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
PSMB3-211ENST00000619426 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
PSMB3-211ENST00000619426 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
PSMB3-211ENST00000619426 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
PSMB3-211ENST00000619426 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
PSMB3-211ENST00000619426 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
PSMB3-211ENST00000619426 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
PSMB3-211ENST00000619426 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.026e-12■■■■■ 50.2
PSMB3-211ENST00000619426 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
PSMB3-211ENST00000619426 CHD1O14646 1710 aa21.38■■□□□ 1.01
PSMB3-211ENST00000619426 CUX1P39880 1505 aa21.37■■□□□ 1.01
PSMB3-211ENST00000619426 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
PSMB3-211ENST00000619426 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
PSMB3-211ENST00000619426 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
PSMB3-211ENST00000619426 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
PSMB3-211ENST00000619426 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
PSMB3-211ENST00000619426 SOGA1O94964 1423 aa21.3■■□□□ 1
PSMB3-211ENST00000619426 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
PSMB3-211ENST00000619426 WDR97A6NE52 1622 aa21.27■■□□□ 1
PSMB3-211ENST00000619426 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
PSMB3-211ENST00000619426 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
PSMB3-211ENST00000619426 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
PSMB3-211ENST00000619426 FBLN2P98095 1184 aa21.14■□□□□ 0.97
PSMB3-211ENST00000619426 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
PSMB3-211ENST00000619426 GRIN2BQ13224 1484 aa21.11■□□□□ 0.97
PSMB3-211ENST00000619426 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
PSMB3-211ENST00000619426 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
PSMB3-211ENST00000619426 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
PSMB3-211ENST00000619426 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
PSMB3-211ENST00000619426 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
PSMB3-211ENST00000619426 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
PSMB3-211ENST00000619426 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
PSMB3-211ENST00000619426 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
PSMB3-211ENST00000619426 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
PSMB3-211ENST00000619426 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
PSMB3-211ENST00000619426 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
PSMB3-211ENST00000619426 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
PSMB3-211ENST00000619426 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
PSMB3-211ENST00000619426 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
PSMB3-211ENST00000619426 CEP170Q5SW79 1584 aa20.86■□□□□ 0.93
PSMB3-211ENST00000619426 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
PSMB3-211ENST00000619426 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
PSMB3-211ENST00000619426 NUP160Q12769 1436 aa20.8■□□□□ 0.92
PSMB3-211ENST00000619426 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
PSMB3-211ENST00000619426 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
PSMB3-211ENST00000619426 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
PSMB3-211ENST00000619426 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
PSMB3-211ENST00000619426 IGF1RP08069 1367 aa20.57■□□□□ 0.88
PSMB3-211ENST00000619426 PRG4Q92954 1404 aaPredicted RBP20.56■□□□□ 0.88
PSMB3-211ENST00000619426 CUL7Q14999 1698 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms