RNA–Protein interactions for RNA: ENST00000618102.4

RCC1L-206, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 950 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-206ENST00000618102 NISCHQ9Y2I1 1504 aa39.9■■■■□ 3.98
RCC1L-206ENST00000618102 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
RCC1L-206ENST00000618102 ABCC9O60706 1549 aa35.88■■■■□ 3.33
RCC1L-206ENST00000618102 RB1CC1Q8TDY2 1594 aa34.23■■■■□ 3.07
RCC1L-206ENST00000618102 NACADO15069 1562 aa33.94■■■■□ 3.02
RCC1L-206ENST00000618102 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
RCC1L-206ENST00000618102 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
RCC1L-206ENST00000618102 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
RCC1L-206ENST00000618102 MYO15BQ96JP2 1530 aa33.43■■■□□ 2.94
RCC1L-206ENST00000618102 PABPN1Q86U42 306 aaKnown RBP eCLIP33.26■■■□□ 2.91
RCC1L-206ENST00000618102 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
RCC1L-206ENST00000618102 ZCCHC6Q5VYS8 1495 aaKnown RBP33.11■■■□□ 2.89
RCC1L-206ENST00000618102 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
RCC1L-206ENST00000618102 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
RCC1L-206ENST00000618102 SCRIBQ14160 1630 aa32.74■■■□□ 2.83
RCC1L-206ENST00000618102 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
RCC1L-206ENST00000618102 EIF4G1Q04637 1599 aaKnown RBP32.39■■■□□ 2.78
RCC1L-206ENST00000618102 CECR2Q9BXF3 1484 aa32.33■■■□□ 2.77
RCC1L-206ENST00000618102 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
RCC1L-206ENST00000618102 SMARCA4P51532 1647 aa31.22■■■□□ 2.59
RCC1L-206ENST00000618102 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
RCC1L-206ENST00000618102 ATAD2BQ9ULI0 1458 aa31.15■■■□□ 2.58
RCC1L-206ENST00000618102 HMGXB3Q12766 1538 aa31.14■■■□□ 2.57
RCC1L-206ENST00000618102 BAZ1AQ9NRL2 1556 aaPredicted RBP31.05■■■□□ 2.56
RCC1L-206ENST00000618102 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
RCC1L-206ENST00000618102 CUX2O14529 1486 aa31■■■□□ 2.55
RCC1L-206ENST00000618102 BAZ1BQ9UIG0 1483 aaKnown RBP30.94■■■□□ 2.54
RCC1L-206ENST00000618102 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
RCC1L-206ENST00000618102 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
RCC1L-206ENST00000618102 NESP48681 1621 aa30.77■■■□□ 2.52
RCC1L-206ENST00000618102 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
RCC1L-206ENST00000618102 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
RCC1L-206ENST00000618102 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
RCC1L-206ENST00000618102 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
RCC1L-206ENST00000618102 WIZO95785 1651 aa30.42■■■□□ 2.46
RCC1L-206ENST00000618102 PDS5BQ9NTI5 1447 aa30.41■■■□□ 2.46
RCC1L-206ENST00000618102 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
RCC1L-206ENST00000618102 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
RCC1L-206ENST00000618102 WDR62O43379 1518 aa30.15■■■□□ 2.42
RCC1L-206ENST00000618102 CEP164Q9UPV0 1460 aa30.1■■■□□ 2.41
RCC1L-206ENST00000618102 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
RCC1L-206ENST00000618102 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
RCC1L-206ENST00000618102 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
RCC1L-206ENST00000618102 CFTRP13569 1480 aa29.95■■■□□ 2.39
RCC1L-206ENST00000618102 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
RCC1L-206ENST00000618102 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
RCC1L-206ENST00000618102 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
RCC1L-206ENST00000618102 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
RCC1L-206ENST00000618102 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
RCC1L-206ENST00000618102 TOPBP1Q92547 1522 aa29.43■■■□□ 2.3
RCC1L-206ENST00000618102 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
RCC1L-206ENST00000618102 ABCC8Q09428 1581 aa29.39■■■□□ 2.29
RCC1L-206ENST00000618102 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.29
RCC1L-206ENST00000618102 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
RCC1L-206ENST00000618102 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
RCC1L-206ENST00000618102 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
RCC1L-206ENST00000618102 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
RCC1L-206ENST00000618102 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
RCC1L-206ENST00000618102 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.27
RCC1L-206ENST00000618102 CHD1O14646 1710 aa29.15■■■□□ 2.26
RCC1L-206ENST00000618102 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
RCC1L-206ENST00000618102 ARHGEF11O15085 1522 aa29.09■■■□□ 2.25
RCC1L-206ENST00000618102 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.241e-7■■■■■ 30.9
RCC1L-206ENST00000618102 WDR97A6NE52 1622 aa29■■■□□ 2.23
RCC1L-206ENST00000618102 RAD54L2Q9Y4B4 1467 aa28.97■■■□□ 2.23
RCC1L-206ENST00000618102 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.22
RCC1L-206ENST00000618102 SOGA1O94964 1423 aa28.93■■■□□ 2.22
RCC1L-206ENST00000618102 CUX1P39880 1505 aa28.89■■■□□ 2.22
RCC1L-206ENST00000618102 FBLN2P98095 1184 aa28.87■■■□□ 2.21
RCC1L-206ENST00000618102 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
RCC1L-206ENST00000618102 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
RCC1L-206ENST00000618102 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
RCC1L-206ENST00000618102 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
RCC1L-206ENST00000618102 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
RCC1L-206ENST00000618102 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
RCC1L-206ENST00000618102 GRIN2BQ13224 1484 aa28.75■■■□□ 2.19
RCC1L-206ENST00000618102 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
RCC1L-206ENST00000618102 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
RCC1L-206ENST00000618102 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
RCC1L-206ENST00000618102 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
RCC1L-206ENST00000618102 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
RCC1L-206ENST00000618102 GAPVD1Q14C86 1478 aa28.63■■■□□ 2.17
RCC1L-206ENST00000618102 ABCA10Q8WWZ4 1543 aa28.61■■■□□ 2.17
RCC1L-206ENST00000618102 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
RCC1L-206ENST00000618102 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
RCC1L-206ENST00000618102 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
RCC1L-206ENST00000618102 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
RCC1L-206ENST00000618102 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
RCC1L-206ENST00000618102 ADAMTS12P58397 1594 aa28.45■■■□□ 2.15
RCC1L-206ENST00000618102 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
RCC1L-206ENST00000618102 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
RCC1L-206ENST00000618102 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
RCC1L-206ENST00000618102 NUP160Q12769 1436 aa28.26■■■□□ 2.12
RCC1L-206ENST00000618102 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
RCC1L-206ENST00000618102 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
RCC1L-206ENST00000618102 ERCC6L2Q5T890 1561 aa28.23■■■□□ 2.11
RCC1L-206ENST00000618102 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.08
RCC1L-206ENST00000618102 PRG4Q92954 1404 aaPredicted RBP27.98■■■□□ 2.07
RCC1L-206ENST00000618102 CUL7Q14999 1698 aa27.96■■■□□ 2.07
RCC1L-206ENST00000618102 KIF13AQ9H1H9 1805 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms