RNA–Protein interactions for RNA: ENST00000618053.1

ACACA-241, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 3

Gene ACACA, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-241ENST00000618053 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
ACACA-241ENST00000618053 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
ACACA-241ENST00000618053 ABCC9O60706 1549 aa17.69■□□□□ 0.42
ACACA-241ENST00000618053 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
ACACA-241ENST00000618053 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
ACACA-241ENST00000618053 NACADO15069 1562 aa16.75■□□□□ 0.27
ACACA-241ENST00000618053 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
ACACA-241ENST00000618053 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
ACACA-241ENST00000618053 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
ACACA-241ENST00000618053 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
ACACA-241ENST00000618053 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
ACACA-241ENST00000618053 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
ACACA-241ENST00000618053 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
ACACA-241ENST00000618053 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
ACACA-241ENST00000618053 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
ACACA-241ENST00000618053 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
ACACA-241ENST00000618053 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
ACACA-241ENST00000618053 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
ACACA-241ENST00000618053 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
ACACA-241ENST00000618053 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
ACACA-241ENST00000618053 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
ACACA-241ENST00000618053 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
ACACA-241ENST00000618053 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
ACACA-241ENST00000618053 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
ACACA-241ENST00000618053 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
ACACA-241ENST00000618053 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.05
ACACA-241ENST00000618053 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
ACACA-241ENST00000618053 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
ACACA-241ENST00000618053 CUX2O14529 1486 aa15.21■□□□□ 0.03
ACACA-241ENST00000618053 NESP48681 1621 aa15.19■□□□□ 0.02
ACACA-241ENST00000618053 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
ACACA-241ENST00000618053 WIZO95785 1651 aa15.08■□□□□ 0
ACACA-241ENST00000618053 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
ACACA-241ENST00000618053 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
ACACA-241ENST00000618053 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
ACACA-241ENST00000618053 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
ACACA-241ENST00000618053 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
ACACA-241ENST00000618053 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
ACACA-241ENST00000618053 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
ACACA-241ENST00000618053 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
ACACA-241ENST00000618053 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
ACACA-241ENST00000618053 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
ACACA-241ENST00000618053 WDR62O43379 1518 aa14.84□□□□□ -0.03
ACACA-241ENST00000618053 CFTRP13569 1480 aa14.82□□□□□ -0.04
ACACA-241ENST00000618053 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
ACACA-241ENST00000618053 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
ACACA-241ENST00000618053 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
ACACA-241ENST00000618053 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
ACACA-241ENST00000618053 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
ACACA-241ENST00000618053 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
ACACA-241ENST00000618053 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
ACACA-241ENST00000618053 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
ACACA-241ENST00000618053 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
ACACA-241ENST00000618053 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
ACACA-241ENST00000618053 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
ACACA-241ENST00000618053 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
ACACA-241ENST00000618053 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
ACACA-241ENST00000618053 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
ACACA-241ENST00000618053 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACACA-241ENST00000618053 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
ACACA-241ENST00000618053 SOGA1O94964 1423 aa14.36□□□□□ -0.11
ACACA-241ENST00000618053 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
ACACA-241ENST00000618053 FBLN2P98095 1184 aa14.35□□□□□ -0.11
ACACA-241ENST00000618053 CHD1O14646 1710 aa14.33□□□□□ -0.12
ACACA-241ENST00000618053 CUX1P39880 1505 aa14.33□□□□□ -0.12
ACACA-241ENST00000618053 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
ACACA-241ENST00000618053 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
ACACA-241ENST00000618053 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
ACACA-241ENST00000618053 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
ACACA-241ENST00000618053 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
ACACA-241ENST00000618053 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
ACACA-241ENST00000618053 ARHGEF11O15085 1522 aa14.29□□□□□ -0.12
ACACA-241ENST00000618053 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
ACACA-241ENST00000618053 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
ACACA-241ENST00000618053 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
ACACA-241ENST00000618053 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
ACACA-241ENST00000618053 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
ACACA-241ENST00000618053 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
ACACA-241ENST00000618053 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
ACACA-241ENST00000618053 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
ACACA-241ENST00000618053 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
ACACA-241ENST00000618053 WRNQ14191 1432 aaPredicted RBP eCLIP14.17□□□□□ -0.14
ACACA-241ENST00000618053 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
ACACA-241ENST00000618053 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
ACACA-241ENST00000618053 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
ACACA-241ENST00000618053 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
ACACA-241ENST00000618053 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
ACACA-241ENST00000618053 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
ACACA-241ENST00000618053 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
ACACA-241ENST00000618053 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
ACACA-241ENST00000618053 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
ACACA-241ENST00000618053 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
ACACA-241ENST00000618053 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
ACACA-241ENST00000618053 NUP160Q12769 1436 aa13.98□□□□□ -0.17
ACACA-241ENST00000618053 ERCC6L2Q5T890 1561 aa13.92□□□□□ -0.18
ACACA-241ENST00000618053 SHROOM2Q13796 1616 aa13.9□□□□□ -0.19
ACACA-241ENST00000618053 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
ACACA-241ENST00000618053 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
ACACA-241ENST00000618053 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
ACACA-241ENST00000618053 CUL7Q14999 1698 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms