RNA–Protein interactions for RNA: ENST00000617325.1

COG3-205, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 3

Gene COG3, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-205ENST00000617325 NISCHQ9Y2I1 1504 aa55.45■■■■■ 6.47
COG3-205ENST00000617325 CCDC180Q9P1Z9 1646 aa49.56■■■■■ 5.52
COG3-205ENST00000617325 ABCC9O60706 1549 aa49.04■■■■■ 5.44
COG3-205ENST00000617325 RB1CC1Q8TDY2 1594 aa46.92■■■■■ 5.1
COG3-205ENST00000617325 NACADO15069 1562 aa46.73■■■■■ 5.07
COG3-205ENST00000617325 DCAF8L2P0C7V8 631 aa46.54■■■■■ 5.04
COG3-205ENST00000617325 MYO15BQ96JP2 1530 aa46.26■■■■■ 5
COG3-205ENST00000617325 ZCCHC6Q5VYS8 1495 aaKnown RBP46.06■■■■■ 4.96
COG3-205ENST00000617325 UNC13AQ9UPW8 1703 aa45.88■■■■■ 4.93
COG3-205ENST00000617325 DCAF1Q9Y4B6 1507 aa45.85■■■■■ 4.93
COG3-205ENST00000617325 PABPN1Q86U42 306 aaKnown RBP eCLIP45.72■■■■■ 4.91
COG3-205ENST00000617325 DNAJC5BQ9UF47 199 aa45.55■■■■■ 4.88
COG3-205ENST00000617325 BICRAQ9NZM4 1560 aa45.54■■■■■ 4.88
COG3-205ENST00000617325 SCRIBQ14160 1630 aa45.17■■■■■ 4.82
COG3-205ENST00000617325 SHROOM4Q9ULL8 1493 aa45■■■■■ 4.79
COG3-205ENST00000617325 EIF4G1Q04637 1599 aaKnown RBP44.37■■■■■ 4.69
COG3-205ENST00000617325 CC2D2AQ9P2K1 1620 aa44.34■■■■■ 4.69
COG3-205ENST00000617325 CECR2Q9BXF3 1484 aa44.14■■■■■ 4.66
COG3-205ENST00000617325 SMARCA4P51532 1647 aa43.15■■■■■ 4.5
COG3-205ENST00000617325 NCAPD3P42695 1498 aa43.12■■■■■ 4.49
COG3-205ENST00000617325 ATAD2BQ9ULI0 1458 aa43.06■■■■■ 4.48
COG3-205ENST00000617325 BAZ1AQ9NRL2 1556 aaPredicted RBP43.01■■■■■ 4.48
COG3-205ENST00000617325 SMARCA2P51531 1590 aa42.99■■■■■ 4.47
COG3-205ENST00000617325 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
COG3-205ENST00000617325 PEG3Q9GZU2 1588 aa42.74■■■■■ 4.43
COG3-205ENST00000617325 MROH2BQ7Z745 1585 aa42.73■■■■■ 4.43
COG3-205ENST00000617325 BAZ1BQ9UIG0 1483 aaKnown RBP42.67■■■■■ 4.42
COG3-205ENST00000617325 ERCC6Q03468 1493 aa42.32■■■■■ 4.37
COG3-205ENST00000617325 NESP48681 1621 aa42.28■■■■■ 4.36
COG3-205ENST00000617325 WIZO95785 1651 aa42.24■■■■■ 4.35
COG3-205ENST00000617325 CUX2O14529 1486 aa42.08■■■■■ 4.33
COG3-205ENST00000617325 LAMC3Q9Y6N6 1575 aa42.08■■■■■ 4.33
COG3-205ENST00000617325 RSF1Q96T23 1441 aaPredicted RBP42.02■■■■■ 4.32
COG3-205ENST00000617325 CADPSQ9ULU8 1353 aa41.83■■■■■ 4.29
COG3-205ENST00000617325 PDS5BQ9NTI5 1447 aa41.81■■■■■ 4.28
COG3-205ENST00000617325 KIF21AQ7Z4S6 1674 aa41.77■■■■■ 4.28
COG3-205ENST00000617325 THOC2Q8NI27 1593 aaKnown RBP41.76■■■■■ 4.28
COG3-205ENST00000617325 TOP2AP11388 1531 aaKnown RBP41.74■■■■■ 4.27
COG3-205ENST00000617325 DNAJC5Q9H3Z4 198 aa41.48■■■■■ 4.23
COG3-205ENST00000617325 CFTRP13569 1480 aa41.47■■■■■ 4.23
COG3-205ENST00000617325 MRC2Q9UBG0 1479 aa41.42■■■■■ 4.22
COG3-205ENST00000617325 FANCD2Q9BXW9 1451 aa41.36■■■■■ 4.21
COG3-205ENST00000617325 CEP164Q9UPV0 1460 aa41.36■■■■■ 4.21
COG3-205ENST00000617325 WDR62O43379 1518 aa41.31■■■■■ 4.2
COG3-205ENST00000617325 CCDC88BA6NC98 1476 aa41.26■■■■■ 4.2
COG3-205ENST00000617325 PRDM2Q13029 1718 aa41.12■■■■■ 4.17
COG3-205ENST00000617325 URB2Q14146 1524 aaKnown RBP40.99■■■■■ 4.15
COG3-205ENST00000617325 TOPBP1Q92547 1522 aa40.63■■■■■ 4.1
COG3-205ENST00000617325 ABCC8Q09428 1581 aa40.59■■■■■ 4.09
COG3-205ENST00000617325 DNMBPQ6XZF7 1577 aa40.53■■■■■ 4.08
COG3-205ENST00000617325 IFT140Q96RY7 1462 aa40.51■■■■■ 4.08
COG3-205ENST00000617325 SUPT5HO00267 1087 aaKnown RBP40.51■■■■■ 4.08
COG3-205ENST00000617325 ZNF608Q9ULD9 1512 aaPredicted RBP40.39■■■■■ 4.06
COG3-205ENST00000617325 POLA1P09884 1462 aaPredicted RBP40.26■■■■■ 4.03
COG3-205ENST00000617325 TARBP1Q13395 1621 aaKnown RBP40.24■■■■■ 4.03
COG3-205ENST00000617325 OSCARQ8IYS5 282 aa40.23■■■■■ 4.03
COG3-205ENST00000617325 EIF4G3O43432 1585 aaKnown RBP40.21■■■■■ 4.03
COG3-205ENST00000617325 CUX1P39880 1505 aa40.11■■■■■ 4.01
COG3-205ENST00000617325 AQRO60306 1485 aaKnown RBP eCLIP40.08■■■■■ 4.012e-6■■■■□ 25.4
COG3-205ENST00000617325 RAD54L2Q9Y4B4 1467 aa40.08■■■■■ 4.01
COG3-205ENST00000617325 SOGA1O94964 1423 aa40.07■■■■■ 4
COG3-205ENST00000617325 FGD5Q6ZNL6 1462 aa40.07■■■■■ 4
COG3-205ENST00000617325 TDRD9Q8NDG6 1382 aaKnown RBP39.92■■■■□ 3.98
COG3-205ENST00000617325 WDR97A6NE52 1622 aa39.88■■■■□ 3.97
COG3-205ENST00000617325 TRIM41Q8WV44 630 aa39.85■■■■□ 3.97
COG3-205ENST00000617325 CHD1O14646 1710 aa39.82■■■■□ 3.96
COG3-205ENST00000617325 FBLN2P98095 1184 aa39.71■■■■□ 3.95
COG3-205ENST00000617325 SNAPC4Q5SXM2 1469 aa39.7■■■■□ 3.95
COG3-205ENST00000617325 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
COG3-205ENST00000617325 RIMBP3CA6NJZ7 1639 aa39.66■■■■□ 3.94
COG3-205ENST00000617325 RIMBP3BA6NNM3 1639 aa39.66■■■■□ 3.94
COG3-205ENST00000617325 RIMBP3Q9UFD9 1639 aa39.66■■■■□ 3.94
COG3-205ENST00000617325 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
COG3-205ENST00000617325 WRNQ14191 1432 aaPredicted RBP eCLIP39.64■■■■□ 3.94
COG3-205ENST00000617325 MAGI1Q96QZ7 1491 aaPredicted RBP39.63■■■■□ 3.94
COG3-205ENST00000617325 TOP2BQ02880 1626 aa39.62■■■■□ 3.93
COG3-205ENST00000617325 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
COG3-205ENST00000617325 GAPVD1Q14C86 1478 aa39.6■■■■□ 3.93
COG3-205ENST00000617325 ARHGEF11O15085 1522 aa39.6■■■■□ 3.93
COG3-205ENST00000617325 SYNJ1O43426 1573 aa39.58■■■■□ 3.93
COG3-205ENST00000617325 PBRM1Q86U86 1689 aa39.56■■■■□ 3.92
COG3-205ENST00000617325 ABCA5Q8WWZ7 1642 aa39.55■■■■□ 3.92
COG3-205ENST00000617325 CHMP7Q8WUX9 453 aaPredicted RBP39.52■■■■□ 3.92
COG3-205ENST00000617325 SYNJ2O15056 1496 aa39.49■■■■□ 3.91
COG3-205ENST00000617325 CLASP1Q7Z460 1538 aa39.37■■■■□ 3.89
COG3-205ENST00000617325 CYB5RLQ6IPT4 315 aa39.25■■■■□ 3.87
COG3-205ENST00000617325 ARAP1Q96P48 1450 aa39.24■■■■□ 3.87
COG3-205ENST00000617325 ADAMTS12P58397 1594 aa39.21■■■■□ 3.87
COG3-205ENST00000617325 ERICH3Q5RHP9 1530 aa39.17■■■■□ 3.86
COG3-205ENST00000617325 GRIN2AQ12879 1464 aa39.17■■■■□ 3.86
COG3-205ENST00000617325 FHAD1B1AJZ9 1412 aa39.12■■■■□ 3.85
COG3-205ENST00000617325 NUP160Q12769 1436 aa39.02■■■■□ 3.84
COG3-205ENST00000617325 CEP170Q5SW79 1584 aa38.99■■■■□ 3.83
COG3-205ENST00000617325 KIF27Q86VH2 1401 aa38.85■■■■□ 3.81
COG3-205ENST00000617325 SHROOM2Q13796 1616 aa38.8■■■■□ 3.8
COG3-205ENST00000617325 ERCC6L2Q5T890 1561 aa38.78■■■■□ 3.8
COG3-205ENST00000617325 IGF1RP08069 1367 aa38.77■■■■□ 3.8
COG3-205ENST00000617325 CUL7Q14999 1698 aa38.7■■■■□ 3.79
COG3-205ENST00000617325 RUSC2Q8N2Y8 1516 aa38.65■■■■□ 3.78
COG3-205ENST00000617325 TRHP20396 242 aaPredicted RBP38.64■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms