RNA–Protein interactions for RNA: ENST00000616278.4

DDB2-211, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-211ENST00000616278 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
DDB2-211ENST00000616278 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
DDB2-211ENST00000616278 ABCC9O60706 1549 aa23.64■■□□□ 1.38
DDB2-211ENST00000616278 NACADO15069 1562 aa22.93■■□□□ 1.26
DDB2-211ENST00000616278 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
DDB2-211ENST00000616278 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
DDB2-211ENST00000616278 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
DDB2-211ENST00000616278 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
DDB2-211ENST00000616278 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
DDB2-211ENST00000616278 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
DDB2-211ENST00000616278 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
DDB2-211ENST00000616278 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
DDB2-211ENST00000616278 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
DDB2-211ENST00000616278 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
DDB2-211ENST00000616278 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
DDB2-211ENST00000616278 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
DDB2-211ENST00000616278 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
DDB2-211ENST00000616278 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
DDB2-211ENST00000616278 SMARCA4P51532 1647 aa21.29■■□□□ 1
DDB2-211ENST00000616278 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
DDB2-211ENST00000616278 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
DDB2-211ENST00000616278 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
DDB2-211ENST00000616278 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
DDB2-211ENST00000616278 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
DDB2-211ENST00000616278 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
DDB2-211ENST00000616278 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
DDB2-211ENST00000616278 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
DDB2-211ENST00000616278 WIZO95785 1651 aa20.9■□□□□ 0.94
DDB2-211ENST00000616278 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
DDB2-211ENST00000616278 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
DDB2-211ENST00000616278 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
DDB2-211ENST00000616278 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
DDB2-211ENST00000616278 NESP48681 1621 aa20.47■□□□□ 0.87
DDB2-211ENST00000616278 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
DDB2-211ENST00000616278 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
DDB2-211ENST00000616278 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
DDB2-211ENST00000616278 PRDM2Q13029 1718 aa20.39■□□□□ 0.86
DDB2-211ENST00000616278 CFTRP13569 1480 aa20.39■□□□□ 0.85
DDB2-211ENST00000616278 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
DDB2-211ENST00000616278 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
DDB2-211ENST00000616278 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
DDB2-211ENST00000616278 CUX2O14529 1486 aa20.24■□□□□ 0.83
DDB2-211ENST00000616278 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
DDB2-211ENST00000616278 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
DDB2-211ENST00000616278 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
DDB2-211ENST00000616278 WDR62O43379 1518 aa20.12■□□□□ 0.81
DDB2-211ENST00000616278 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
DDB2-211ENST00000616278 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
DDB2-211ENST00000616278 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
DDB2-211ENST00000616278 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
DDB2-211ENST00000616278 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
DDB2-211ENST00000616278 CUX1P39880 1505 aa19.79■□□□□ 0.76
DDB2-211ENST00000616278 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
DDB2-211ENST00000616278 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
DDB2-211ENST00000616278 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
DDB2-211ENST00000616278 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
DDB2-211ENST00000616278 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
DDB2-211ENST00000616278 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
DDB2-211ENST00000616278 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
DDB2-211ENST00000616278 SOGA1O94964 1423 aa19.68■□□□□ 0.74
DDB2-211ENST00000616278 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
DDB2-211ENST00000616278 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
DDB2-211ENST00000616278 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
DDB2-211ENST00000616278 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
DDB2-211ENST00000616278 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
DDB2-211ENST00000616278 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■■■■■ 29.2
DDB2-211ENST00000616278 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
DDB2-211ENST00000616278 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
DDB2-211ENST00000616278 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
DDB2-211ENST00000616278 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
DDB2-211ENST00000616278 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
DDB2-211ENST00000616278 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
DDB2-211ENST00000616278 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
DDB2-211ENST00000616278 CHD1O14646 1710 aa19.39■□□□□ 0.7
DDB2-211ENST00000616278 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
DDB2-211ENST00000616278 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
DDB2-211ENST00000616278 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
DDB2-211ENST00000616278 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
DDB2-211ENST00000616278 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
DDB2-211ENST00000616278 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
DDB2-211ENST00000616278 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
DDB2-211ENST00000616278 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
DDB2-211ENST00000616278 FBLN2P98095 1184 aa19.26■□□□□ 0.67
DDB2-211ENST00000616278 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
DDB2-211ENST00000616278 CUL7Q14999 1698 aa19.25■□□□□ 0.67
DDB2-211ENST00000616278 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
DDB2-211ENST00000616278 IGF1RP08069 1367 aa19.18■□□□□ 0.66
DDB2-211ENST00000616278 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
DDB2-211ENST00000616278 NUP160Q12769 1436 aa19.11■□□□□ 0.65
DDB2-211ENST00000616278 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
DDB2-211ENST00000616278 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
DDB2-211ENST00000616278 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
DDB2-211ENST00000616278 EEA1Q15075 1411 aa19.08■□□□□ 0.64
DDB2-211ENST00000616278 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
DDB2-211ENST00000616278 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
DDB2-211ENST00000616278 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
DDB2-211ENST00000616278 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
DDB2-211ENST00000616278 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
DDB2-211ENST00000616278 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
DDB2-211ENST00000616278 SHROOM2Q13796 1616 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms