RNA–Protein interactions for RNA: ENST00000616141.4

AC244669.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC244669.1, Length 715 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC244669.1-201ENST00000616141 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
AC244669.1-201ENST00000616141 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
AC244669.1-201ENST00000616141 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
AC244669.1-201ENST00000616141 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
AC244669.1-201ENST00000616141 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
AC244669.1-201ENST00000616141 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
AC244669.1-201ENST00000616141 ABCC9O60706 1549 aa18.02■□□□□ 0.47
AC244669.1-201ENST00000616141 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
AC244669.1-201ENST00000616141 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
AC244669.1-201ENST00000616141 NACADO15069 1562 aa17.14■□□□□ 0.33
AC244669.1-201ENST00000616141 FOXD1Q16676 465 aa17.03■□□□□ 0.32
AC244669.1-201ENST00000616141 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
AC244669.1-201ENST00000616141 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
AC244669.1-201ENST00000616141 ADRA2BP18089 450 aa16.83■□□□□ 0.28
AC244669.1-201ENST00000616141 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
AC244669.1-201ENST00000616141 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
AC244669.1-201ENST00000616141 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
AC244669.1-201ENST00000616141 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
AC244669.1-201ENST00000616141 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
AC244669.1-201ENST00000616141 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
AC244669.1-201ENST00000616141 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
AC244669.1-201ENST00000616141 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
AC244669.1-201ENST00000616141 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
AC244669.1-201ENST00000616141 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
AC244669.1-201ENST00000616141 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
AC244669.1-201ENST00000616141 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
AC244669.1-201ENST00000616141 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
AC244669.1-201ENST00000616141 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
AC244669.1-201ENST00000616141 KCNA4P22459 653 aa16.15■□□□□ 0.18
AC244669.1-201ENST00000616141 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
AC244669.1-201ENST00000616141 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
AC244669.1-201ENST00000616141 CUX2O14529 1486 aa15.71■□□□□ 0.1
AC244669.1-201ENST00000616141 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
AC244669.1-201ENST00000616141 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
AC244669.1-201ENST00000616141 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
AC244669.1-201ENST00000616141 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
AC244669.1-201ENST00000616141 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
AC244669.1-201ENST00000616141 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
AC244669.1-201ENST00000616141 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
AC244669.1-201ENST00000616141 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
AC244669.1-201ENST00000616141 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
AC244669.1-201ENST00000616141 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
AC244669.1-201ENST00000616141 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
AC244669.1-201ENST00000616141 MSH5O43196 834 aa15.45■□□□□ 0.06
AC244669.1-201ENST00000616141 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
AC244669.1-201ENST00000616141 NESP48681 1621 aa15.43■□□□□ 0.06
AC244669.1-201ENST00000616141 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
AC244669.1-201ENST00000616141 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
AC244669.1-201ENST00000616141 MROH2BQ7Z745 1585 aa15.39■□□□□ 0.05
AC244669.1-201ENST00000616141 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
AC244669.1-201ENST00000616141 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
AC244669.1-201ENST00000616141 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
AC244669.1-201ENST00000616141 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
AC244669.1-201ENST00000616141 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
AC244669.1-201ENST00000616141 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
AC244669.1-201ENST00000616141 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.03
AC244669.1-201ENST00000616141 WDR62O43379 1518 aa15.2■□□□□ 0.02
AC244669.1-201ENST00000616141 WIZO95785 1651 aa15.19■□□□□ 0.02
AC244669.1-201ENST00000616141 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
AC244669.1-201ENST00000616141 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
AC244669.1-201ENST00000616141 CFTRP13569 1480 aa15.1■□□□□ 0.01
AC244669.1-201ENST00000616141 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
AC244669.1-201ENST00000616141 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
AC244669.1-201ENST00000616141 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
AC244669.1-201ENST00000616141 PRDM2Q13029 1718 aa15□□□□□ -0.01
AC244669.1-201ENST00000616141 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
AC244669.1-201ENST00000616141 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
AC244669.1-201ENST00000616141 ZBTB22O15209 634 aa14.88□□□□□ -0.03
AC244669.1-201ENST00000616141 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
AC244669.1-201ENST00000616141 IFT140Q96RY7 1462 aa14.85□□□□□ -0.03
AC244669.1-201ENST00000616141 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
AC244669.1-201ENST00000616141 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
AC244669.1-201ENST00000616141 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
AC244669.1-201ENST00000616141 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
AC244669.1-201ENST00000616141 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
AC244669.1-201ENST00000616141 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
AC244669.1-201ENST00000616141 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
AC244669.1-201ENST00000616141 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
AC244669.1-201ENST00000616141 RIMBP3CA6NJZ7 1639 aa14.71□□□□□ -0.05
AC244669.1-201ENST00000616141 RIMBP3BA6NNM3 1639 aa14.71□□□□□ -0.05
AC244669.1-201ENST00000616141 RIMBP3Q9UFD9 1639 aa14.71□□□□□ -0.05
AC244669.1-201ENST00000616141 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
AC244669.1-201ENST00000616141 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
AC244669.1-201ENST00000616141 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
AC244669.1-201ENST00000616141 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
AC244669.1-201ENST00000616141 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
AC244669.1-201ENST00000616141 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
AC244669.1-201ENST00000616141 CHD1O14646 1710 aa14.61□□□□□ -0.07
AC244669.1-201ENST00000616141 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.08
AC244669.1-201ENST00000616141 SOGA1O94964 1423 aa14.54□□□□□ -0.08
AC244669.1-201ENST00000616141 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
AC244669.1-201ENST00000616141 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
AC244669.1-201ENST00000616141 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
AC244669.1-201ENST00000616141 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
AC244669.1-201ENST00000616141 CUX1P39880 1505 aa14.48□□□□□ -0.09
AC244669.1-201ENST00000616141 CLASP1Q7Z460 1538 aa14.48□□□□□ -0.09
AC244669.1-201ENST00000616141 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
AC244669.1-201ENST00000616141 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
AC244669.1-201ENST00000616141 GRIN2BQ13224 1484 aa14.47□□□□□ -0.09
AC244669.1-201ENST00000616141 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms