RNA–Protein interactions for RNA: ENST00000616113.1

AC087742.2-201, humanhuman

BASIC

Gene AC087742.2, Length 740 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087742.2-201ENST00000616113 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
AC087742.2-201ENST00000616113 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
AC087742.2-201ENST00000616113 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
AC087742.2-201ENST00000616113 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
AC087742.2-201ENST00000616113 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
AC087742.2-201ENST00000616113 FOXD1Q16676 465 aa17.81■□□□□ 0.44
AC087742.2-201ENST00000616113 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
AC087742.2-201ENST00000616113 ABCC9O60706 1549 aa17.39■□□□□ 0.37
AC087742.2-201ENST00000616113 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
AC087742.2-201ENST00000616113 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
AC087742.2-201ENST00000616113 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
AC087742.2-201ENST00000616113 ADRA2BP18089 450 aa16.73■□□□□ 0.27
AC087742.2-201ENST00000616113 NACADO15069 1562 aa16.72■□□□□ 0.27
AC087742.2-201ENST00000616113 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
AC087742.2-201ENST00000616113 MSH5O43196 834 aa16.64■□□□□ 0.25
AC087742.2-201ENST00000616113 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
AC087742.2-201ENST00000616113 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
AC087742.2-201ENST00000616113 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
AC087742.2-201ENST00000616113 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
AC087742.2-201ENST00000616113 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
AC087742.2-201ENST00000616113 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
AC087742.2-201ENST00000616113 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
AC087742.2-201ENST00000616113 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
AC087742.2-201ENST00000616113 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
AC087742.2-201ENST00000616113 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
AC087742.2-201ENST00000616113 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
AC087742.2-201ENST00000616113 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
AC087742.2-201ENST00000616113 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
AC087742.2-201ENST00000616113 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
AC087742.2-201ENST00000616113 SMARCA4P51532 1647 aa15.47■□□□□ 0.07
AC087742.2-201ENST00000616113 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
AC087742.2-201ENST00000616113 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
AC087742.2-201ENST00000616113 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
AC087742.2-201ENST00000616113 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
AC087742.2-201ENST00000616113 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
AC087742.2-201ENST00000616113 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
AC087742.2-201ENST00000616113 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
AC087742.2-201ENST00000616113 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
AC087742.2-201ENST00000616113 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
AC087742.2-201ENST00000616113 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
AC087742.2-201ENST00000616113 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
AC087742.2-201ENST00000616113 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
AC087742.2-201ENST00000616113 WIZO95785 1651 aa15.16■□□□□ 0.02
AC087742.2-201ENST00000616113 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
AC087742.2-201ENST00000616113 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
AC087742.2-201ENST00000616113 NESP48681 1621 aa15.03■□□□□ -0
AC087742.2-201ENST00000616113 TOP2AP11388 1531 aaKnown RBP15.02□□□□□ -0.01
AC087742.2-201ENST00000616113 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
AC087742.2-201ENST00000616113 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
AC087742.2-201ENST00000616113 CUX2O14529 1486 aa14.92□□□□□ -0.02
AC087742.2-201ENST00000616113 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
AC087742.2-201ENST00000616113 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
AC087742.2-201ENST00000616113 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
AC087742.2-201ENST00000616113 CFTRP13569 1480 aa14.86□□□□□ -0.03
AC087742.2-201ENST00000616113 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
AC087742.2-201ENST00000616113 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
AC087742.2-201ENST00000616113 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
AC087742.2-201ENST00000616113 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
AC087742.2-201ENST00000616113 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
AC087742.2-201ENST00000616113 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
AC087742.2-201ENST00000616113 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
AC087742.2-201ENST00000616113 WDR62O43379 1518 aa14.73□□□□□ -0.05
AC087742.2-201ENST00000616113 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
AC087742.2-201ENST00000616113 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
AC087742.2-201ENST00000616113 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
AC087742.2-201ENST00000616113 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
AC087742.2-201ENST00000616113 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
AC087742.2-201ENST00000616113 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
AC087742.2-201ENST00000616113 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
AC087742.2-201ENST00000616113 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
AC087742.2-201ENST00000616113 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
AC087742.2-201ENST00000616113 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
AC087742.2-201ENST00000616113 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
AC087742.2-201ENST00000616113 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
AC087742.2-201ENST00000616113 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
AC087742.2-201ENST00000616113 CUX1P39880 1505 aa14.38□□□□□ -0.11
AC087742.2-201ENST00000616113 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
AC087742.2-201ENST00000616113 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
AC087742.2-201ENST00000616113 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
AC087742.2-201ENST00000616113 SOGA1O94964 1423 aa14.33□□□□□ -0.11
AC087742.2-201ENST00000616113 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
AC087742.2-201ENST00000616113 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
AC087742.2-201ENST00000616113 KCNA4P22459 653 aa14.3□□□□□ -0.12
AC087742.2-201ENST00000616113 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
AC087742.2-201ENST00000616113 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
AC087742.2-201ENST00000616113 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
AC087742.2-201ENST00000616113 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
AC087742.2-201ENST00000616113 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
AC087742.2-201ENST00000616113 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
AC087742.2-201ENST00000616113 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
AC087742.2-201ENST00000616113 ABCA10Q8WWZ4 1543 aa14.23□□□□□ -0.13
AC087742.2-201ENST00000616113 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
AC087742.2-201ENST00000616113 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
AC087742.2-201ENST00000616113 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
AC087742.2-201ENST00000616113 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
AC087742.2-201ENST00000616113 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
AC087742.2-201ENST00000616113 CHD1O14646 1710 aa14.16□□□□□ -0.14
AC087742.2-201ENST00000616113 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
AC087742.2-201ENST00000616113 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
AC087742.2-201ENST00000616113 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms