RNA–Protein interactions for RNA: ENST00000615910.4

TP53-221, Transcript of tumor protein p53, humanhuman

TSL 5 BASIC

Gene TP53, Length 1,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-221ENST00000615910 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
TP53-221ENST00000615910 ABCC9O60706 1549 aa30.14■■■□□ 2.42
TP53-221ENST00000615910 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
TP53-221ENST00000615910 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
TP53-221ENST00000615910 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
TP53-221ENST00000615910 NACADO15069 1562 aa28.31■■■□□ 2.12
TP53-221ENST00000615910 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
TP53-221ENST00000615910 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
TP53-221ENST00000615910 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
TP53-221ENST00000615910 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
TP53-221ENST00000615910 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
TP53-221ENST00000615910 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
TP53-221ENST00000615910 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
TP53-221ENST00000615910 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
TP53-221ENST00000615910 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
TP53-221ENST00000615910 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
TP53-221ENST00000615910 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
TP53-221ENST00000615910 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
TP53-221ENST00000615910 DNAJC5Q9H3Z4 198 aa26.65■■□□□ 1.86
TP53-221ENST00000615910 CUX2O14529 1486 aa26.27■■□□□ 1.8
TP53-221ENST00000615910 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
TP53-221ENST00000615910 ERCC6Q03468 1493 aa26.07■■□□□ 1.76
TP53-221ENST00000615910 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
TP53-221ENST00000615910 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
TP53-221ENST00000615910 SMARCA2P51531 1590 aa25.89■■□□□ 1.73
TP53-221ENST00000615910 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
TP53-221ENST00000615910 NESP48681 1621 aa25.78■■□□□ 1.72
TP53-221ENST00000615910 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
TP53-221ENST00000615910 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
TP53-221ENST00000615910 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
TP53-221ENST00000615910 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
TP53-221ENST00000615910 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
TP53-221ENST00000615910 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
TP53-221ENST00000615910 WIZO95785 1651 aa25.55■■□□□ 1.68
TP53-221ENST00000615910 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
TP53-221ENST00000615910 KIF21AQ7Z4S6 1674 aa25.47■■□□□ 1.67
TP53-221ENST00000615910 PDS5BQ9NTI5 1447 aa25.44■■□□□ 1.66
TP53-221ENST00000615910 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
TP53-221ENST00000615910 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
TP53-221ENST00000615910 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
TP53-221ENST00000615910 WDR62O43379 1518 aa25.26■■□□□ 1.63
TP53-221ENST00000615910 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
TP53-221ENST00000615910 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
TP53-221ENST00000615910 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
TP53-221ENST00000615910 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
TP53-221ENST00000615910 CFTRP13569 1480 aa24.93■■□□□ 1.58
TP53-221ENST00000615910 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
TP53-221ENST00000615910 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
TP53-221ENST00000615910 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
TP53-221ENST00000615910 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
TP53-221ENST00000615910 RIMBP3CA6NJZ7 1639 aa24.67■■□□□ 1.54
TP53-221ENST00000615910 RIMBP3BA6NNM3 1639 aa24.67■■□□□ 1.54
TP53-221ENST00000615910 RIMBP3Q9UFD9 1639 aa24.67■■□□□ 1.54
TP53-221ENST00000615910 IFT140Q96RY7 1462 aa24.59■■□□□ 1.53
TP53-221ENST00000615910 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
TP53-221ENST00000615910 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
TP53-221ENST00000615910 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
TP53-221ENST00000615910 EIF4G3O43432 1585 aaKnown RBP24.45■■□□□ 1.5
TP53-221ENST00000615910 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
TP53-221ENST00000615910 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
TP53-221ENST00000615910 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
TP53-221ENST00000615910 CHD1O14646 1710 aa24.32■■□□□ 1.48
TP53-221ENST00000615910 ARAP1Q96P48 1450 aa24.28■■□□□ 1.48
TP53-221ENST00000615910 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
TP53-221ENST00000615910 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.478e-7■■■□□ 16.1
TP53-221ENST00000615910 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
TP53-221ENST00000615910 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
TP53-221ENST00000615910 TRHP20396 242 aaPredicted RBP24.1■■□□□ 1.45
TP53-221ENST00000615910 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
TP53-221ENST00000615910 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
TP53-221ENST00000615910 CLASP1Q7Z460 1538 aa24.09■■□□□ 1.45
TP53-221ENST00000615910 FBLN2P98095 1184 aa24.08■■□□□ 1.45
TP53-221ENST00000615910 WRNQ14191 1432 aaPredicted RBP eCLIP24.07■■□□□ 1.44
TP53-221ENST00000615910 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
TP53-221ENST00000615910 CUX1P39880 1505 aa24.05■■□□□ 1.44
TP53-221ENST00000615910 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
TP53-221ENST00000615910 SOGA1O94964 1423 aa24.03■■□□□ 1.44
TP53-221ENST00000615910 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
TP53-221ENST00000615910 TDRD9Q8NDG6 1382 aaKnown RBP24.01■■□□□ 1.43
TP53-221ENST00000615910 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
TP53-221ENST00000615910 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
TP53-221ENST00000615910 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
TP53-221ENST00000615910 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
TP53-221ENST00000615910 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
TP53-221ENST00000615910 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
TP53-221ENST00000615910 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
TP53-221ENST00000615910 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
TP53-221ENST00000615910 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
TP53-221ENST00000615910 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
TP53-221ENST00000615910 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
TP53-221ENST00000615910 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
TP53-221ENST00000615910 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
TP53-221ENST00000615910 NUP160Q12769 1436 aa23.59■■□□□ 1.37
TP53-221ENST00000615910 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
TP53-221ENST00000615910 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
TP53-221ENST00000615910 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
TP53-221ENST00000615910 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
TP53-221ENST00000615910 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
TP53-221ENST00000615910 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
TP53-221ENST00000615910 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms