RNA–Protein interactions for RNA: ENST00000614498.4

ARCN1-205, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-205ENST00000614498 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
ARCN1-205ENST00000614498 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
ARCN1-205ENST00000614498 ABCC9O60706 1549 aa19.02■□□□□ 0.64
ARCN1-205ENST00000614498 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
ARCN1-205ENST00000614498 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
ARCN1-205ENST00000614498 NACADO15069 1562 aa18.05■□□□□ 0.48
ARCN1-205ENST00000614498 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
ARCN1-205ENST00000614498 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
ARCN1-205ENST00000614498 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
ARCN1-205ENST00000614498 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
ARCN1-205ENST00000614498 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
ARCN1-205ENST00000614498 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
ARCN1-205ENST00000614498 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
ARCN1-205ENST00000614498 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
ARCN1-205ENST00000614498 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
ARCN1-205ENST00000614498 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
ARCN1-205ENST00000614498 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
ARCN1-205ENST00000614498 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
ARCN1-205ENST00000614498 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
ARCN1-205ENST00000614498 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
ARCN1-205ENST00000614498 BAZ1AQ9NRL2 1556 aaPredicted RBP16.69■□□□□ 0.26
ARCN1-205ENST00000614498 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
ARCN1-205ENST00000614498 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
ARCN1-205ENST00000614498 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.26
ARCN1-205ENST00000614498 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
ARCN1-205ENST00000614498 CUX2O14529 1486 aa16.64■□□□□ 0.25
ARCN1-205ENST00000614498 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
ARCN1-205ENST00000614498 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.25
ARCN1-205ENST00000614498 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
ARCN1-205ENST00000614498 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.24
ARCN1-205ENST00000614498 WIZO95785 1651 aa16.51■□□□□ 0.23
ARCN1-205ENST00000614498 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
ARCN1-205ENST00000614498 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
ARCN1-205ENST00000614498 NESP48681 1621 aa16.37■□□□□ 0.21
ARCN1-205ENST00000614498 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
ARCN1-205ENST00000614498 HRCP23327 699 aa16.29■□□□□ 0.2
ARCN1-205ENST00000614498 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
ARCN1-205ENST00000614498 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
ARCN1-205ENST00000614498 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
ARCN1-205ENST00000614498 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
ARCN1-205ENST00000614498 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
ARCN1-205ENST00000614498 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
ARCN1-205ENST00000614498 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
ARCN1-205ENST00000614498 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
ARCN1-205ENST00000614498 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
ARCN1-205ENST00000614498 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
ARCN1-205ENST00000614498 CFTRP13569 1480 aa16.05■□□□□ 0.16
ARCN1-205ENST00000614498 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
ARCN1-205ENST00000614498 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
ARCN1-205ENST00000614498 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
ARCN1-205ENST00000614498 WDR62O43379 1518 aa15.95■□□□□ 0.14
ARCN1-205ENST00000614498 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
ARCN1-205ENST00000614498 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
ARCN1-205ENST00000614498 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
ARCN1-205ENST00000614498 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
ARCN1-205ENST00000614498 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
ARCN1-205ENST00000614498 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
ARCN1-205ENST00000614498 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
ARCN1-205ENST00000614498 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
ARCN1-205ENST00000614498 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
ARCN1-205ENST00000614498 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
ARCN1-205ENST00000614498 IFT140Q96RY7 1462 aa15.62■□□□□ 0.09
ARCN1-205ENST00000614498 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
ARCN1-205ENST00000614498 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
ARCN1-205ENST00000614498 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
ARCN1-205ENST00000614498 CUX1P39880 1505 aa15.61■□□□□ 0.09
ARCN1-205ENST00000614498 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
ARCN1-205ENST00000614498 EIF4G3O43432 1585 aaKnown RBP15.59■□□□□ 0.09
ARCN1-205ENST00000614498 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
ARCN1-205ENST00000614498 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
ARCN1-205ENST00000614498 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
ARCN1-205ENST00000614498 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.072e-6■■■■□ 26.7
ARCN1-205ENST00000614498 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
ARCN1-205ENST00000614498 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
ARCN1-205ENST00000614498 SOGA1O94964 1423 aa15.5■□□□□ 0.07
ARCN1-205ENST00000614498 CHD1O14646 1710 aa15.48■□□□□ 0.07
ARCN1-205ENST00000614498 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
ARCN1-205ENST00000614498 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
ARCN1-205ENST00000614498 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.06
ARCN1-205ENST00000614498 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
ARCN1-205ENST00000614498 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
ARCN1-205ENST00000614498 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
ARCN1-205ENST00000614498 FAM9AQ8IZU1 332 aaPredicted RBP15.4■□□□□ 0.06
ARCN1-205ENST00000614498 CYB5RLQ6IPT4 315 aa15.39■□□□□ 0.05
ARCN1-205ENST00000614498 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
ARCN1-205ENST00000614498 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
ARCN1-205ENST00000614498 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
ARCN1-205ENST00000614498 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
ARCN1-205ENST00000614498 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
ARCN1-205ENST00000614498 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
ARCN1-205ENST00000614498 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
ARCN1-205ENST00000614498 FBLN2P98095 1184 aa15.31■□□□□ 0.04
ARCN1-205ENST00000614498 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
ARCN1-205ENST00000614498 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
ARCN1-205ENST00000614498 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
ARCN1-205ENST00000614498 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
ARCN1-205ENST00000614498 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
ARCN1-205ENST00000614498 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
ARCN1-205ENST00000614498 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
ARCN1-205ENST00000614498 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms