RNA–Protein interactions for RNA: ENST00000613408.1

AC006335.3-201, humanhuman

BASIC

Gene AC006335.3, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006335.3-201ENST00000613408 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
AC006335.3-201ENST00000613408 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
AC006335.3-201ENST00000613408 ABCC9O60706 1549 aa15.83■□□□□ 0.12
AC006335.3-201ENST00000613408 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
AC006335.3-201ENST00000613408 NACADO15069 1562 aa15.28■□□□□ 0.04
AC006335.3-201ENST00000613408 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
AC006335.3-201ENST00000613408 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
AC006335.3-201ENST00000613408 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
AC006335.3-201ENST00000613408 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
AC006335.3-201ENST00000613408 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
AC006335.3-201ENST00000613408 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
AC006335.3-201ENST00000613408 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
AC006335.3-201ENST00000613408 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
AC006335.3-201ENST00000613408 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
AC006335.3-201ENST00000613408 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
AC006335.3-201ENST00000613408 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
AC006335.3-201ENST00000613408 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
AC006335.3-201ENST00000613408 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
AC006335.3-201ENST00000613408 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
AC006335.3-201ENST00000613408 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
AC006335.3-201ENST00000613408 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
AC006335.3-201ENST00000613408 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
AC006335.3-201ENST00000613408 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
AC006335.3-201ENST00000613408 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
AC006335.3-201ENST00000613408 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
AC006335.3-201ENST00000613408 HMGXB3Q12766 1538 aa14.06□□□□□ -0.16
AC006335.3-201ENST00000613408 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
AC006335.3-201ENST00000613408 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
AC006335.3-201ENST00000613408 WIZO95785 1651 aa13.94□□□□□ -0.18
AC006335.3-201ENST00000613408 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
AC006335.3-201ENST00000613408 NESP48681 1621 aa13.72□□□□□ -0.21
AC006335.3-201ENST00000613408 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
AC006335.3-201ENST00000613408 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
AC006335.3-201ENST00000613408 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
AC006335.3-201ENST00000613408 CCDC88BA6NC98 1476 aa13.63□□□□□ -0.23
AC006335.3-201ENST00000613408 CFTRP13569 1480 aa13.62□□□□□ -0.23
AC006335.3-201ENST00000613408 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
AC006335.3-201ENST00000613408 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
AC006335.3-201ENST00000613408 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
AC006335.3-201ENST00000613408 PRDM2Q13029 1718 aa13.54□□□□□ -0.24
AC006335.3-201ENST00000613408 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
AC006335.3-201ENST00000613408 CUX2O14529 1486 aa13.52□□□□□ -0.25
AC006335.3-201ENST00000613408 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
AC006335.3-201ENST00000613408 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
AC006335.3-201ENST00000613408 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
AC006335.3-201ENST00000613408 WDR62O43379 1518 aa13.46□□□□□ -0.25
AC006335.3-201ENST00000613408 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
AC006335.3-201ENST00000613408 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
AC006335.3-201ENST00000613408 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
AC006335.3-201ENST00000613408 TOPBP1Q92547 1522 aa13.32□□□□□ -0.28
AC006335.3-201ENST00000613408 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
AC006335.3-201ENST00000613408 CUX1P39880 1505 aa13.24□□□□□ -0.29
AC006335.3-201ENST00000613408 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
AC006335.3-201ENST00000613408 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
AC006335.3-201ENST00000613408 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
AC006335.3-201ENST00000613408 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
AC006335.3-201ENST00000613408 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
AC006335.3-201ENST00000613408 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
AC006335.3-201ENST00000613408 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
AC006335.3-201ENST00000613408 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
AC006335.3-201ENST00000613408 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
AC006335.3-201ENST00000613408 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
AC006335.3-201ENST00000613408 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
AC006335.3-201ENST00000613408 SOGA1O94964 1423 aa13.11□□□□□ -0.31
AC006335.3-201ENST00000613408 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
AC006335.3-201ENST00000613408 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
AC006335.3-201ENST00000613408 AQRO60306 1485 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC006335.3-201ENST00000613408 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
AC006335.3-201ENST00000613408 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
AC006335.3-201ENST00000613408 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
AC006335.3-201ENST00000613408 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
AC006335.3-201ENST00000613408 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
AC006335.3-201ENST00000613408 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
AC006335.3-201ENST00000613408 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
AC006335.3-201ENST00000613408 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
AC006335.3-201ENST00000613408 CHD1O14646 1710 aa12.93□□□□□ -0.34
AC006335.3-201ENST00000613408 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
AC006335.3-201ENST00000613408 ADAMTS12P58397 1594 aa12.91□□□□□ -0.34
AC006335.3-201ENST00000613408 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
AC006335.3-201ENST00000613408 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
AC006335.3-201ENST00000613408 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
AC006335.3-201ENST00000613408 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
AC006335.3-201ENST00000613408 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
AC006335.3-201ENST00000613408 FBLN2P98095 1184 aa12.83□□□□□ -0.36
AC006335.3-201ENST00000613408 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
AC006335.3-201ENST00000613408 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
AC006335.3-201ENST00000613408 CUL7Q14999 1698 aa12.81□□□□□ -0.36
AC006335.3-201ENST00000613408 IGF1RP08069 1367 aa12.8□□□□□ -0.36
AC006335.3-201ENST00000613408 NUP160Q12769 1436 aa12.79□□□□□ -0.36
AC006335.3-201ENST00000613408 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
AC006335.3-201ENST00000613408 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
AC006335.3-201ENST00000613408 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
AC006335.3-201ENST00000613408 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
AC006335.3-201ENST00000613408 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
AC006335.3-201ENST00000613408 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
AC006335.3-201ENST00000613408 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.37
AC006335.3-201ENST00000613408 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
AC006335.3-201ENST00000613408 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
AC006335.3-201ENST00000613408 EEA1Q15075 1411 aa12.67□□□□□ -0.38
AC006335.3-201ENST00000613408 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms