RNA–Protein interactions for RNA: ENST00000612569.1

ABCA7-219, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-219ENST00000612569 NISCHQ9Y2I1 1504 aa42.56■■■■■ 4.4
ABCA7-219ENST00000612569 CCDC180Q9P1Z9 1646 aa38.44■■■■□ 3.74
ABCA7-219ENST00000612569 ABCC9O60706 1549 aa38.4■■■■□ 3.74
ABCA7-219ENST00000612569 RB1CC1Q8TDY2 1594 aa36.56■■■■□ 3.44
ABCA7-219ENST00000612569 NACADO15069 1562 aa36.26■■■■□ 3.39
ABCA7-219ENST00000612569 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
ABCA7-219ENST00000612569 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
ABCA7-219ENST00000612569 MYO15BQ96JP2 1530 aa35.75■■■■□ 3.31
ABCA7-219ENST00000612569 DCAF8L2P0C7V8 631 aa35.64■■■■□ 3.3
ABCA7-219ENST00000612569 PABPN1Q86U42 306 aaKnown RBP eCLIP35.58■■■■□ 3.295e-7■■■■□ 24
ABCA7-219ENST00000612569 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
ABCA7-219ENST00000612569 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
ABCA7-219ENST00000612569 DCAF1Q9Y4B6 1507 aa35.21■■■■□ 3.23
ABCA7-219ENST00000612569 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
ABCA7-219ENST00000612569 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
ABCA7-219ENST00000612569 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
ABCA7-219ENST00000612569 EIF4G1Q04637 1599 aaKnown RBP34.67■■■■□ 3.14
ABCA7-219ENST00000612569 CECR2Q9BXF3 1484 aa34.63■■■■□ 3.13
ABCA7-219ENST00000612569 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
ABCA7-219ENST00000612569 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
ABCA7-219ENST00000612569 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
ABCA7-219ENST00000612569 ATAD2BQ9ULI0 1458 aa33.3■■■□□ 2.92
ABCA7-219ENST00000612569 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
ABCA7-219ENST00000612569 CUX2O14529 1486 aa33.26■■■□□ 2.92
ABCA7-219ENST00000612569 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
ABCA7-219ENST00000612569 ERCC6Q03468 1493 aa33.14■■■□□ 2.9
ABCA7-219ENST00000612569 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
ABCA7-219ENST00000612569 PEG3Q9GZU2 1588 aa33.02■■■□□ 2.88
ABCA7-219ENST00000612569 NESP48681 1621 aa32.97■■■□□ 2.87
ABCA7-219ENST00000612569 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
ABCA7-219ENST00000612569 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
ABCA7-219ENST00000612569 MROH2BQ7Z745 1585 aa32.78■■■□□ 2.84
ABCA7-219ENST00000612569 LAMC3Q9Y6N6 1575 aa32.78■■■□□ 2.84
ABCA7-219ENST00000612569 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
ABCA7-219ENST00000612569 PDS5BQ9NTI5 1447 aa32.46■■■□□ 2.79
ABCA7-219ENST00000612569 WIZO95785 1651 aa32.42■■■□□ 2.78
ABCA7-219ENST00000612569 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
ABCA7-219ENST00000612569 MRC2Q9UBG0 1479 aa32.28■■■□□ 2.76
ABCA7-219ENST00000612569 WDR62O43379 1518 aa32.27■■■□□ 2.76
ABCA7-219ENST00000612569 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
ABCA7-219ENST00000612569 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
ABCA7-219ENST00000612569 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
ABCA7-219ENST00000612569 CFTRP13569 1480 aa32■■■□□ 2.71
ABCA7-219ENST00000612569 RSF1Q96T23 1441 aaPredicted RBP31.97■■■□□ 2.71
ABCA7-219ENST00000612569 PRDM2Q13029 1718 aa31.89■■■□□ 2.69
ABCA7-219ENST00000612569 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
ABCA7-219ENST00000612569 TRIM41Q8WV44 630 aa31.68■■■□□ 2.66
ABCA7-219ENST00000612569 CCDC88BA6NC98 1476 aa31.54■■■□□ 2.64
ABCA7-219ENST00000612569 OSCARQ8IYS5 282 aa31.49■■■□□ 2.63
ABCA7-219ENST00000612569 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
ABCA7-219ENST00000612569 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
ABCA7-219ENST00000612569 ZNF608Q9ULD9 1512 aaPredicted RBP31.43■■■□□ 2.62
ABCA7-219ENST00000612569 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
ABCA7-219ENST00000612569 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
ABCA7-219ENST00000612569 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
ABCA7-219ENST00000612569 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
ABCA7-219ENST00000612569 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
ABCA7-219ENST00000612569 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
ABCA7-219ENST00000612569 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
ABCA7-219ENST00000612569 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
ABCA7-219ENST00000612569 CHD1O14646 1710 aa31.18■■■□□ 2.58
ABCA7-219ENST00000612569 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
ABCA7-219ENST00000612569 AQRO60306 1485 aaKnown RBP eCLIP31.04■■■□□ 2.567e-8■■■■■ 32.4
ABCA7-219ENST00000612569 WDR97A6NE52 1622 aa30.95■■■□□ 2.54
ABCA7-219ENST00000612569 RAD54L2Q9Y4B4 1467 aa30.92■■■□□ 2.54
ABCA7-219ENST00000612569 ARAP1Q96P48 1450 aa30.89■■■□□ 2.53
ABCA7-219ENST00000612569 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
ABCA7-219ENST00000612569 SOGA1O94964 1423 aa30.83■■■□□ 2.53
ABCA7-219ENST00000612569 CUX1P39880 1505 aa30.83■■■□□ 2.53
ABCA7-219ENST00000612569 SUPT5HO00267 1087 aaKnown RBP30.81■■■□□ 2.52
ABCA7-219ENST00000612569 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
ABCA7-219ENST00000612569 CLASP1Q7Z460 1538 aa30.79■■■□□ 2.52
ABCA7-219ENST00000612569 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
ABCA7-219ENST00000612569 CYB5RLQ6IPT4 315 aa30.74■■■□□ 2.51
ABCA7-219ENST00000612569 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
ABCA7-219ENST00000612569 FBLN2P98095 1184 aa30.72■■■□□ 2.51
ABCA7-219ENST00000612569 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
ABCA7-219ENST00000612569 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
ABCA7-219ENST00000612569 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
ABCA7-219ENST00000612569 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
ABCA7-219ENST00000612569 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
ABCA7-219ENST00000612569 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
ABCA7-219ENST00000612569 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.48
ABCA7-219ENST00000612569 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
ABCA7-219ENST00000612569 TRHP20396 242 aaPredicted RBP30.43■■■□□ 2.46
ABCA7-219ENST00000612569 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
ABCA7-219ENST00000612569 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
ABCA7-219ENST00000612569 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
ABCA7-219ENST00000612569 GRIN2AQ12879 1464 aa30.3■■■□□ 2.44
ABCA7-219ENST00000612569 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
ABCA7-219ENST00000612569 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
ABCA7-219ENST00000612569 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
ABCA7-219ENST00000612569 NUP160Q12769 1436 aa30.22■■■□□ 2.43
ABCA7-219ENST00000612569 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
ABCA7-219ENST00000612569 ERICH3Q5RHP9 1530 aa30.14■■■□□ 2.42
ABCA7-219ENST00000612569 FHAD1B1AJZ9 1412 aa30.12■■■□□ 2.41
ABCA7-219ENST00000612569 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
ABCA7-219ENST00000612569 KIF13AQ9H1H9 1805 aa29.94■■■□□ 2.38
ABCA7-219ENST00000612569 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
ABCA7-219ENST00000612569 CUL7Q14999 1698 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms