RNA–Protein interactions for RNA: ENST00000611968.1

DDX3X-209, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 3

Gene DDX3X, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-209ENST00000611968 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
DDX3X-209ENST00000611968 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
DDX3X-209ENST00000611968 ABCC9O60706 1549 aa33.71■■■□□ 2.99
DDX3X-209ENST00000611968 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
DDX3X-209ENST00000611968 NACADO15069 1562 aa32.24■■■□□ 2.75
DDX3X-209ENST00000611968 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
DDX3X-209ENST00000611968 DCAF8L2P0C7V8 631 aa31.83■■■□□ 2.69
DDX3X-209ENST00000611968 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
DDX3X-209ENST00000611968 DCAF1Q9Y4B6 1507 aa31.64■■■□□ 2.66
DDX3X-209ENST00000611968 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
DDX3X-209ENST00000611968 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
DDX3X-209ENST00000611968 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.613e-7■■□□□ 14.4
DDX3X-209ENST00000611968 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
DDX3X-209ENST00000611968 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
DDX3X-209ENST00000611968 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
DDX3X-209ENST00000611968 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
DDX3X-209ENST00000611968 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
DDX3X-209ENST00000611968 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
DDX3X-209ENST00000611968 SMARCA4P51532 1647 aa29.72■■■□□ 2.35
DDX3X-209ENST00000611968 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
DDX3X-209ENST00000611968 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
DDX3X-209ENST00000611968 SMARCA2P51531 1590 aa29.64■■■□□ 2.33
DDX3X-209ENST00000611968 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.33
DDX3X-209ENST00000611968 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
DDX3X-209ENST00000611968 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
DDX3X-209ENST00000611968 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
DDX3X-209ENST00000611968 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
DDX3X-209ENST00000611968 ERCC6Q03468 1493 aa29.14■■■□□ 2.26
DDX3X-209ENST00000611968 CUX2O14529 1486 aa29.07■■■□□ 2.24
DDX3X-209ENST00000611968 NESP48681 1621 aa29.05■■■□□ 2.24
DDX3X-209ENST00000611968 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
DDX3X-209ENST00000611968 WIZO95785 1651 aa29.02■■■□□ 2.24
DDX3X-209ENST00000611968 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
DDX3X-209ENST00000611968 THOC2Q8NI27 1593 aaKnown RBP28.81■■■□□ 2.2
DDX3X-209ENST00000611968 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
DDX3X-209ENST00000611968 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
DDX3X-209ENST00000611968 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
DDX3X-209ENST00000611968 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
DDX3X-209ENST00000611968 CFTRP13569 1480 aa28.56■■■□□ 2.16
DDX3X-209ENST00000611968 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
DDX3X-209ENST00000611968 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
DDX3X-209ENST00000611968 WDR62O43379 1518 aa28.5■■■□□ 2.15
DDX3X-209ENST00000611968 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
DDX3X-209ENST00000611968 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
DDX3X-209ENST00000611968 PRDM2Q13029 1718 aa28.39■■■□□ 2.14
DDX3X-209ENST00000611968 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
DDX3X-209ENST00000611968 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
DDX3X-209ENST00000611968 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
DDX3X-209ENST00000611968 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
DDX3X-209ENST00000611968 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
DDX3X-209ENST00000611968 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
DDX3X-209ENST00000611968 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
DDX3X-209ENST00000611968 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
DDX3X-209ENST00000611968 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
DDX3X-209ENST00000611968 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.03
DDX3X-209ENST00000611968 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
DDX3X-209ENST00000611968 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
DDX3X-209ENST00000611968 CUX1P39880 1505 aa27.59■■■□□ 2.01
DDX3X-209ENST00000611968 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
DDX3X-209ENST00000611968 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
DDX3X-209ENST00000611968 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 23e-7■■■■■ 30.5
DDX3X-209ENST00000611968 SOGA1O94964 1423 aa27.53■■■□□ 2
DDX3X-209ENST00000611968 RAD54L2Q9Y4B4 1467 aa27.51■■■□□ 2
DDX3X-209ENST00000611968 CHD1O14646 1710 aa27.43■■□□□ 1.98
DDX3X-209ENST00000611968 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
DDX3X-209ENST00000611968 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
DDX3X-209ENST00000611968 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
DDX3X-209ENST00000611968 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
DDX3X-209ENST00000611968 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
DDX3X-209ENST00000611968 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
DDX3X-209ENST00000611968 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
DDX3X-209ENST00000611968 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
DDX3X-209ENST00000611968 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
DDX3X-209ENST00000611968 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
DDX3X-209ENST00000611968 ARHGEF11O15085 1522 aa27.28■■□□□ 1.96
DDX3X-209ENST00000611968 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
DDX3X-209ENST00000611968 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
DDX3X-209ENST00000611968 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
DDX3X-209ENST00000611968 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
DDX3X-209ENST00000611968 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
DDX3X-209ENST00000611968 FBLN2P98095 1184 aa27.21■■□□□ 1.95
DDX3X-209ENST00000611968 SYNJ2O15056 1496 aa27.2■■□□□ 1.95
DDX3X-209ENST00000611968 SYNJ1O43426 1573 aa27.2■■□□□ 1.94
DDX3X-209ENST00000611968 CLASP1Q7Z460 1538 aa27.15■■□□□ 1.94
DDX3X-209ENST00000611968 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
DDX3X-209ENST00000611968 ADAMTS12P58397 1594 aa27.03■■□□□ 1.92
DDX3X-209ENST00000611968 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
DDX3X-209ENST00000611968 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
DDX3X-209ENST00000611968 GRIN2AQ12879 1464 aa26.97■■□□□ 1.91
DDX3X-209ENST00000611968 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
DDX3X-209ENST00000611968 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
DDX3X-209ENST00000611968 NUP160Q12769 1436 aa26.89■■□□□ 1.89
DDX3X-209ENST00000611968 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
DDX3X-209ENST00000611968 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
DDX3X-209ENST00000611968 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
DDX3X-209ENST00000611968 CUL7Q14999 1698 aa26.69■■□□□ 1.86
DDX3X-209ENST00000611968 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
DDX3X-209ENST00000611968 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
DDX3X-209ENST00000611968 IGF1RP08069 1367 aa26.61■■□□□ 1.85
DDX3X-209ENST00000611968 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 1076.5 ms