RNA–Protein interactions for RNA: ENST00000611490.4

ABCA7-218, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 343 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-218ENST00000611490 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
ABCA7-218ENST00000611490 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
ABCA7-218ENST00000611490 ABCC9O60706 1549 aa35.86■■■■□ 3.33
ABCA7-218ENST00000611490 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
ABCA7-218ENST00000611490 NACADO15069 1562 aa34.55■■■■□ 3.12
ABCA7-218ENST00000611490 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
ABCA7-218ENST00000611490 ZCCHC6Q5VYS8 1495 aaKnown RBP34.45■■■■□ 3.1
ABCA7-218ENST00000611490 MYO15BQ96JP2 1530 aa34.38■■■■□ 3.09
ABCA7-218ENST00000611490 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
ABCA7-218ENST00000611490 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
ABCA7-218ENST00000611490 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
ABCA7-218ENST00000611490 SCRIBQ14160 1630 aa33.49■■■□□ 2.95
ABCA7-218ENST00000611490 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
ABCA7-218ENST00000611490 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
ABCA7-218ENST00000611490 DNAJC5BQ9UF47 199 aa32.79■■■□□ 2.84
ABCA7-218ENST00000611490 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
ABCA7-218ENST00000611490 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
ABCA7-218ENST00000611490 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
ABCA7-218ENST00000611490 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
ABCA7-218ENST00000611490 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
ABCA7-218ENST00000611490 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
ABCA7-218ENST00000611490 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
ABCA7-218ENST00000611490 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
ABCA7-218ENST00000611490 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
ABCA7-218ENST00000611490 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
ABCA7-218ENST00000611490 HMGXB3Q12766 1538 aa31.72■■■□□ 2.67
ABCA7-218ENST00000611490 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
ABCA7-218ENST00000611490 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
ABCA7-218ENST00000611490 WIZO95785 1651 aa31.45■■■□□ 2.63
ABCA7-218ENST00000611490 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
ABCA7-218ENST00000611490 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
ABCA7-218ENST00000611490 NESP48681 1621 aa31.01■■■□□ 2.55
ABCA7-218ENST00000611490 ERCC6Q03468 1493 aa30.98■■■□□ 2.55
ABCA7-218ENST00000611490 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
ABCA7-218ENST00000611490 PDS5BQ9NTI5 1447 aa30.86■■■□□ 2.53
ABCA7-218ENST00000611490 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
ABCA7-218ENST00000611490 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
ABCA7-218ENST00000611490 CFTRP13569 1480 aa30.76■■■□□ 2.52
ABCA7-218ENST00000611490 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
ABCA7-218ENST00000611490 CUX2O14529 1486 aa30.63■■■□□ 2.49
ABCA7-218ENST00000611490 FANCD2Q9BXW9 1451 aa30.58■■■□□ 2.49
ABCA7-218ENST00000611490 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
ABCA7-218ENST00000611490 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
ABCA7-218ENST00000611490 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
ABCA7-218ENST00000611490 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
ABCA7-218ENST00000611490 WDR62O43379 1518 aa30.37■■■□□ 2.45
ABCA7-218ENST00000611490 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
ABCA7-218ENST00000611490 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
ABCA7-218ENST00000611490 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
ABCA7-218ENST00000611490 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
ABCA7-218ENST00000611490 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
ABCA7-218ENST00000611490 CUX1P39880 1505 aa29.86■■■□□ 2.37
ABCA7-218ENST00000611490 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
ABCA7-218ENST00000611490 FGD5Q6ZNL6 1462 aa29.77■■■□□ 2.36
ABCA7-218ENST00000611490 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
ABCA7-218ENST00000611490 SOGA1O94964 1423 aa29.74■■■□□ 2.35
ABCA7-218ENST00000611490 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
ABCA7-218ENST00000611490 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
ABCA7-218ENST00000611490 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
ABCA7-218ENST00000611490 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
ABCA7-218ENST00000611490 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
ABCA7-218ENST00000611490 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
ABCA7-218ENST00000611490 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
ABCA7-218ENST00000611490 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
ABCA7-218ENST00000611490 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
ABCA7-218ENST00000611490 AQRO60306 1485 aaKnown RBP eCLIP29.57■■■□□ 2.32
ABCA7-218ENST00000611490 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
ABCA7-218ENST00000611490 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
ABCA7-218ENST00000611490 GRIN2BQ13224 1484 aa29.41■■■□□ 2.3
ABCA7-218ENST00000611490 GAPVD1Q14C86 1478 aa29.4■■■□□ 2.3
ABCA7-218ENST00000611490 OSCARQ8IYS5 282 aa29.38■■■□□ 2.29
ABCA7-218ENST00000611490 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
ABCA7-218ENST00000611490 MAGI1Q96QZ7 1491 aaPredicted RBP29.33■■■□□ 2.29
ABCA7-218ENST00000611490 SNAPC4Q5SXM2 1469 aa29.32■■■□□ 2.28
ABCA7-218ENST00000611490 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
ABCA7-218ENST00000611490 FBLN2P98095 1184 aa29.27■■■□□ 2.28
ABCA7-218ENST00000611490 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
ABCA7-218ENST00000611490 CHD1O14646 1710 aa29.2■■■□□ 2.27
ABCA7-218ENST00000611490 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
ABCA7-218ENST00000611490 ERICH3Q5RHP9 1530 aa29.17■■■□□ 2.26
ABCA7-218ENST00000611490 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
ABCA7-218ENST00000611490 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
ABCA7-218ENST00000611490 FHAD1B1AJZ9 1412 aa29.08■■■□□ 2.25
ABCA7-218ENST00000611490 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
ABCA7-218ENST00000611490 GRIN2AQ12879 1464 aa29■■■□□ 2.23
ABCA7-218ENST00000611490 IGF1RP08069 1367 aa28.97■■■□□ 2.23
ABCA7-218ENST00000611490 CLASP1Q7Z460 1538 aa28.92■■■□□ 2.22
ABCA7-218ENST00000611490 CUL7Q14999 1698 aa28.91■■■□□ 2.22
ABCA7-218ENST00000611490 NUP160Q12769 1436 aa28.87■■■□□ 2.21
ABCA7-218ENST00000611490 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
ABCA7-218ENST00000611490 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
ABCA7-218ENST00000611490 RIMBP3CA6NJZ7 1639 aa28.82■■■□□ 2.2
ABCA7-218ENST00000611490 RIMBP3BA6NNM3 1639 aa28.82■■■□□ 2.2
ABCA7-218ENST00000611490 RIMBP3Q9UFD9 1639 aa28.82■■■□□ 2.2
ABCA7-218ENST00000611490 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
ABCA7-218ENST00000611490 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
ABCA7-218ENST00000611490 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
ABCA7-218ENST00000611490 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
ABCA7-218ENST00000611490 EEA1Q15075 1411 aa28.66■■■□□ 2.18
ABCA7-218ENST00000611490 KIAA0586Q9BVV6 1533 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms