RNA–Protein interactions for RNA: ENST00000611484.4

GABRR1-206, Transcript of gamma-aminobutyric acid type A receptor rho1 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRR1, Length 3,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1-206ENST00000611484 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
GABRR1-206ENST00000611484 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
GABRR1-206ENST00000611484 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
GABRR1-206ENST00000611484 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
GABRR1-206ENST00000611484 MYT1Q01538 1121 aa11.7□□□□□ -0.54
GABRR1-206ENST00000611484 HRCP23327 699 aa11.6□□□□□ -0.55
GABRR1-206ENST00000611484 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
GABRR1-206ENST00000611484 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
GABRR1-206ENST00000611484 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
GABRR1-206ENST00000611484 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
GABRR1-206ENST00000611484 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
GABRR1-206ENST00000611484 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
GABRR1-206ENST00000611484 ABCC9O60706 1549 aa10.98□□□□□ -0.65
GABRR1-206ENST00000611484 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
GABRR1-206ENST00000611484 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
GABRR1-206ENST00000611484 ZCCHC6Q5VYS8 1495 aaKnown RBP10.92□□□□□ -0.66
GABRR1-206ENST00000611484 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
GABRR1-206ENST00000611484 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
GABRR1-206ENST00000611484 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
GABRR1-206ENST00000611484 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
GABRR1-206ENST00000611484 APLP2Q06481 763 aa10.82□□□□□ -0.68
GABRR1-206ENST00000611484 LOC105371045A0A1W2PR82 267 aa10.82□□□□□ -0.68
GABRR1-206ENST00000611484 CHIC1Q5VXU3 224 aa10.79□□□□□ -0.68
GABRR1-206ENST00000611484 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
GABRR1-206ENST00000611484 BCL11AQ9H165 835 aa10.76□□□□□ -0.69
GABRR1-206ENST00000611484 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
GABRR1-206ENST00000611484 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
GABRR1-206ENST00000611484 ERICH6Q7L0X2 663 aa10.72□□□□□ -0.69
GABRR1-206ENST00000611484 TRIM26Q12899 539 aaPredicted RBP10.68□□□□□ -0.7
GABRR1-206ENST00000611484 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
GABRR1-206ENST00000611484 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
GABRR1-206ENST00000611484 CENPBP07199 599 aaPredicted RBP10.62□□□□□ -0.71
GABRR1-206ENST00000611484 GTF3C3Q9Y5Q9 886 aa10.6□□□□□ -0.71
GABRR1-206ENST00000611484 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
GABRR1-206ENST00000611484 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
GABRR1-206ENST00000611484 RANGAP1P46060 587 aaPredicted RBP10.5□□□□□ -0.73
GABRR1-206ENST00000611484 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
GABRR1-206ENST00000611484 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
GABRR1-206ENST00000611484 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
GABRR1-206ENST00000611484 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
GABRR1-206ENST00000611484 CLSPNQ9HAW4 1339 aa10.3□□□□□ -0.76
GABRR1-206ENST00000611484 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
GABRR1-206ENST00000611484 WIZO95785 1651 aa10.28□□□□□ -0.76
GABRR1-206ENST00000611484 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
GABRR1-206ENST00000611484 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
GABRR1-206ENST00000611484 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
GABRR1-206ENST00000611484 NACADO15069 1562 aa10.18□□□□□ -0.78
GABRR1-206ENST00000611484 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
GABRR1-206ENST00000611484 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.79
GABRR1-206ENST00000611484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
GABRR1-206ENST00000611484 EIF5BO60841 1220 aaKnown RBP10.08□□□□□ -0.8
GABRR1-206ENST00000611484 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
GABRR1-206ENST00000611484 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
GABRR1-206ENST00000611484 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
GABRR1-206ENST00000611484 RUSC2Q8N2Y8 1516 aa10.05□□□□□ -0.8
GABRR1-206ENST00000611484 SOGA1O94964 1423 aa10.05□□□□□ -0.8
GABRR1-206ENST00000611484 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
GABRR1-206ENST00000611484 CCER1Q8TC90 406 aaPredicted RBP10.03□□□□□ -0.8
GABRR1-206ENST00000611484 UBE2Q2Q8WVN8 375 aa10.01□□□□□ -0.81
GABRR1-206ENST00000611484 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
GABRR1-206ENST00000611484 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
GABRR1-206ENST00000611484 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
GABRR1-206ENST00000611484 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
GABRR1-206ENST00000611484 ANO8Q9HCE9 1232 aaPredicted RBP9.97□□□□□ -0.81
GABRR1-206ENST00000611484 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
GABRR1-206ENST00000611484 YTHDC1Q96MU7 727 aaKnown RBP9.97□□□□□ -0.81
GABRR1-206ENST00000611484 MIER1Q8N108 512 aa9.97□□□□□ -0.81
GABRR1-206ENST00000611484 SMARCA4P51532 1647 aa9.96□□□□□ -0.82
GABRR1-206ENST00000611484 ITGAEP38570 1179 aa9.95□□□□□ -0.82
GABRR1-206ENST00000611484 BICRAQ9NZM4 1560 aa9.94□□□□□ -0.82
GABRR1-206ENST00000611484 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
GABRR1-206ENST00000611484 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
GABRR1-206ENST00000611484 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.83
GABRR1-206ENST00000611484 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
GABRR1-206ENST00000611484 BAZ1BQ9UIG0 1483 aaKnown RBP9.88□□□□□ -0.83
GABRR1-206ENST00000611484 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
GABRR1-206ENST00000611484 ARID3CA6NKF2 412 aa9.85□□□□□ -0.83
GABRR1-206ENST00000611484 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
GABRR1-206ENST00000611484 WRNQ14191 1432 aaPredicted RBP eCLIP9.84□□□□□ -0.83
GABRR1-206ENST00000611484 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
GABRR1-206ENST00000611484 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
GABRR1-206ENST00000611484 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
GABRR1-206ENST00000611484 MSH5O43196 834 aa9.8□□□□□ -0.84
GABRR1-206ENST00000611484 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
GABRR1-206ENST00000611484 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
GABRR1-206ENST00000611484 DEKP35659 375 aaKnown RBP9.74□□□□□ -0.85
GABRR1-206ENST00000611484 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
GABRR1-206ENST00000611484 PKNOX2Q96KN3 472 aa9.73□□□□□ -0.85
GABRR1-206ENST00000611484 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
GABRR1-206ENST00000611484 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.86
GABRR1-206ENST00000611484 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
GABRR1-206ENST00000611484 NESP48681 1621 aa9.69□□□□□ -0.86
GABRR1-206ENST00000611484 CLIP1P30622 1438 aa9.68□□□□□ -0.86
GABRR1-206ENST00000611484 CCDC136Q96JN2 1154 aa9.65□□□□□ -0.86
GABRR1-206ENST00000611484 FAM50AQ14320 339 aaKnown RBP9.64□□□□□ -0.87
GABRR1-206ENST00000611484 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
GABRR1-206ENST00000611484 FBLN2P98095 1184 aa9.63□□□□□ -0.87
GABRR1-206ENST00000611484 GOLGA3Q08378 1498 aa9.63□□□□□ -0.87
GABRR1-206ENST00000611484 FKBP8Q14318 412 aa9.62□□□□□ -0.87
GABRR1-206ENST00000611484 CUX2O14529 1486 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms