RNA–Protein interactions for RNA: ENST00000610509.1

NPRL3-210, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-210ENST00000610509 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
NPRL3-210ENST00000610509 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
NPRL3-210ENST00000610509 HRCP23327 699 aa22.54■■□□□ 1.2
NPRL3-210ENST00000610509 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
NPRL3-210ENST00000610509 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
NPRL3-210ENST00000610509 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
NPRL3-210ENST00000610509 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
NPRL3-210ENST00000610509 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
NPRL3-210ENST00000610509 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
NPRL3-210ENST00000610509 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
NPRL3-210ENST00000610509 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.05
NPRL3-210ENST00000610509 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
NPRL3-210ENST00000610509 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
NPRL3-210ENST00000610509 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
NPRL3-210ENST00000610509 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
NPRL3-210ENST00000610509 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
NPRL3-210ENST00000610509 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
NPRL3-210ENST00000610509 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
NPRL3-210ENST00000610509 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.92
NPRL3-210ENST00000610509 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
NPRL3-210ENST00000610509 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
NPRL3-210ENST00000610509 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
NPRL3-210ENST00000610509 GTF3C3Q9Y5Q9 886 aa20.64■□□□□ 0.9
NPRL3-210ENST00000610509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
NPRL3-210ENST00000610509 ABCC9O60706 1549 aa20.57■□□□□ 0.88
NPRL3-210ENST00000610509 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
NPRL3-210ENST00000610509 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.88
NPRL3-210ENST00000610509 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
NPRL3-210ENST00000610509 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
NPRL3-210ENST00000610509 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
NPRL3-210ENST00000610509 MYT1Q01538 1121 aa20.45■□□□□ 0.86
NPRL3-210ENST00000610509 TTBK1Q5TCY1 1321 aaPredicted RBP20.31■□□□□ 0.84
NPRL3-210ENST00000610509 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
NPRL3-210ENST00000610509 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
NPRL3-210ENST00000610509 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
NPRL3-210ENST00000610509 MIER1Q8N108 512 aa20.02■□□□□ 0.8
NPRL3-210ENST00000610509 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.79
NPRL3-210ENST00000610509 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
NPRL3-210ENST00000610509 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
NPRL3-210ENST00000610509 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
NPRL3-210ENST00000610509 WIZO95785 1651 aa19.88■□□□□ 0.77
NPRL3-210ENST00000610509 NACADO15069 1562 aa19.8■□□□□ 0.76
NPRL3-210ENST00000610509 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
NPRL3-210ENST00000610509 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
NPRL3-210ENST00000610509 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
NPRL3-210ENST00000610509 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
NPRL3-210ENST00000610509 SOGA1O94964 1423 aa19.74■□□□□ 0.75
NPRL3-210ENST00000610509 TNIKQ9UKE5 1360 aa19.71■□□□□ 0.75
NPRL3-210ENST00000610509 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
NPRL3-210ENST00000610509 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
NPRL3-210ENST00000610509 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
NPRL3-210ENST00000610509 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.74
NPRL3-210ENST00000610509 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
NPRL3-210ENST00000610509 TSHZ2Q9NRE2 1034 aa19.55■□□□□ 0.72
NPRL3-210ENST00000610509 ANP32EQ9BTT0 268 aa19.48■□□□□ 0.71
NPRL3-210ENST00000610509 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
NPRL3-210ENST00000610509 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
NPRL3-210ENST00000610509 EEA1Q15075 1411 aa19.43■□□□□ 0.7
NPRL3-210ENST00000610509 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
NPRL3-210ENST00000610509 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
NPRL3-210ENST00000610509 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
NPRL3-210ENST00000610509 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
NPRL3-210ENST00000610509 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
NPRL3-210ENST00000610509 CLIP1P30622 1438 aa19.37■□□□□ 0.69
NPRL3-210ENST00000610509 BCANQ96GW7 911 aa19.35■□□□□ 0.69
NPRL3-210ENST00000610509 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
NPRL3-210ENST00000610509 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
NPRL3-210ENST00000610509 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
NPRL3-210ENST00000610509 APLP2Q06481 763 aa19.31■□□□□ 0.68
NPRL3-210ENST00000610509 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
NPRL3-210ENST00000610509 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
NPRL3-210ENST00000610509 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
NPRL3-210ENST00000610509 KIF21BO75037 1637 aa19.18■□□□□ 0.66
NPRL3-210ENST00000610509 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
NPRL3-210ENST00000610509 FKBP8Q14318 412 aa19.18■□□□□ 0.66
NPRL3-210ENST00000610509 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
NPRL3-210ENST00000610509 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
NPRL3-210ENST00000610509 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
NPRL3-210ENST00000610509 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
NPRL3-210ENST00000610509 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
NPRL3-210ENST00000610509 ITGAEP38570 1179 aa19.05■□□□□ 0.64
NPRL3-210ENST00000610509 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
NPRL3-210ENST00000610509 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
NPRL3-210ENST00000610509 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
NPRL3-210ENST00000610509 MSH5O43196 834 aa18.95■□□□□ 0.62
NPRL3-210ENST00000610509 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
NPRL3-210ENST00000610509 NEFLP07196 543 aa18.94■□□□□ 0.62
NPRL3-210ENST00000610509 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
NPRL3-210ENST00000610509 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
NPRL3-210ENST00000610509 CUX2O14529 1486 aa18.89■□□□□ 0.61
NPRL3-210ENST00000610509 MAPKBP1O60336 1514 aa18.89■□□□□ 0.61
NPRL3-210ENST00000610509 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
NPRL3-210ENST00000610509 SIN3AQ96ST3 1273 aa18.86■□□□□ 0.61
NPRL3-210ENST00000610509 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
NPRL3-210ENST00000610509 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
NPRL3-210ENST00000610509 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
NPRL3-210ENST00000610509 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
NPRL3-210ENST00000610509 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
NPRL3-210ENST00000610509 ANP32CO43423 234 aa18.73■□□□□ 0.59
NPRL3-210ENST00000610509 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms