RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
SMCHD1-213ENST00000609587 DEFB136Q30KP8 78 aa0.33□□□□□ -2.36
SMCHD1-213ENST00000609587 LOC400499M0QZD8 3231 aa0.32□□□□□ -2.36
SMCHD1-213ENST00000609587 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
SMCHD1-213ENST00000609587 CEP295Q9C0D2 2601 aa0.32□□□□□ -2.36
SMCHD1-213ENST00000609587 CFAP47Q6ZTR5 3102 aa0.28□□□□□ -2.36
SMCHD1-213ENST00000609587 MT1EP04732 61 aa0.28□□□□□ -2.36
SMCHD1-213ENST00000609587 RPS29P62273 56 aaKnown RBP0.28□□□□□ -2.36
SMCHD1-213ENST00000609587 MYO15AQ9UKN7 3530 aa0.27□□□□□ -2.37
SMCHD1-213ENST00000609587 PCNTO95613 3336 aa0.27□□□□□ -2.37
SMCHD1-213ENST00000609587 TLN1Q9Y490 2541 aaKnown RBP0.27□□□□□ -2.37
SMCHD1-213ENST00000609587 EYSQ5T1H1 3165 aa0.27□□□□□ -2.37
SMCHD1-213ENST00000609587 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
SMCHD1-213ENST00000609587 USP34Q70CQ2 3546 aa0.26□□□□□ -2.37
SMCHD1-213ENST00000609587 HTN1P15515 57 aa0.26□□□□□ -2.37
SMCHD1-213ENST00000609587 MT1HP80294 61 aa0.26□□□□□ -2.37
SMCHD1-213ENST00000609587 SPEGQ15772 3267 aa0.25□□□□□ -2.37
SMCHD1-213ENST00000609587 UTRNP46939 3433 aa0.23□□□□□ -2.37
SMCHD1-213ENST00000609587 MYO9AB2RTY4 2548 aa0.23□□□□□ -2.37
SMCHD1-213ENST00000609587 DEFB133Q30KQ1 61 aa0.23□□□□□ -2.37
SMCHD1-213ENST00000609587 MT1LQ93083 61 aa0.23□□□□□ -2.37
SMCHD1-213ENST00000609587 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
SMCHD1-213ENST00000609587 CENPEQ02224 2701 aa0.22□□□□□ -2.37
SMCHD1-213ENST00000609587 ASPMQ8IZT6 3477 aa0.22□□□□□ -2.37
SMCHD1-213ENST00000609587 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
SMCHD1-213ENST00000609587 UNC80Q8N2C7 3258 aa0.21□□□□□ -2.38
SMCHD1-213ENST00000609587 LINC01556Q5JQF7 62 aa0.21□□□□□ -2.38
SMCHD1-213ENST00000609587 DNHD1Q96M86 4753 aa0.21□□□□□ -2.38
SMCHD1-213ENST00000609587 VPS13AQ96RL7 3174 aa0.2□□□□□ -2.38
SMCHD1-213ENST00000609587 STATHP02808 62 aa0.2□□□□□ -2.38
SMCHD1-213ENST00000609587 PCLOQ9Y6V0 5065 aa0.19□□□□□ -2.38
SMCHD1-213ENST00000609587 USH2AO75445 5202 aa0.19□□□□□ -2.38
SMCHD1-213ENST00000609587 A0A096LPF7 62 aa0.18□□□□□ -2.38
SMCHD1-213ENST00000609587 MT1XP80297 61 aa0.17□□□□□ -2.38
SMCHD1-213ENST00000609587 COX14Q96I36 57 aa0.17□□□□□ -2.38
SMCHD1-213ENST00000609587 WDFY3Q8IZQ1 3526 aa0.14□□□□□ -2.39
SMCHD1-213ENST00000609587 EP400Q96L91 3159 aa0.14□□□□□ -2.39
SMCHD1-213ENST00000609587 VCANP13611 3396 aa0.14□□□□□ -2.39
SMCHD1-213ENST00000609587 GOLGB1Q14789 3259 aaKnown RBP0.14□□□□□ -2.39
SMCHD1-213ENST00000609587 DEFB108BQ8NET1 73 aa0.13□□□□□ -2.39
SMCHD1-213ENST00000609587 HERC2O95714 4834 aa0.12□□□□□ -2.39
SMCHD1-213ENST00000609587 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
SMCHD1-213ENST00000609587 UBR4Q5T4S7 5183 aa0.12□□□□□ -2.39
SMCHD1-213ENST00000609587 RYR1P21817 5038 aa0.11□□□□□ -2.39
SMCHD1-213ENST00000609587 BRCA2P51587 3418 aa0.11□□□□□ -2.39
SMCHD1-213ENST00000609587 DEFB4AO15263 64 aa0.11□□□□□ -2.39
SMCHD1-213ENST00000609587 Q9Y3F1 56 aa0.11□□□□□ -2.39
SMCHD1-213ENST00000609587 BIRC6Q9NR09 4857 aa0.1□□□□□ -2.39
SMCHD1-213ENST00000609587 MUC2Q02817 5179 aa0.1□□□□□ -2.39
SMCHD1-213ENST00000609587 CD52P31358 61 aa0.08□□□□□ -2.4
SMCHD1-213ENST00000609587 KRTAP19-7Q3SYF9 63 aa0.08□□□□□ -2.4
SMCHD1-213ENST00000609587 CENPFP49454 3210 aa0.08□□□□□ -2.4
SMCHD1-213ENST00000609587 KRTAP6-1Q3LI64 71 aa0.06□□□□□ -2.4
SMCHD1-213ENST00000609587 RYR3Q15413 4870 aa0.04□□□□□ -2.4
SMCHD1-213ENST00000609587 MT1GP13640 62 aa0.04□□□□□ -2.4
SMCHD1-213ENST00000609587 KRTAP19-8Q3LI54 63 aa0.04□□□□□ -2.4
SMCHD1-213ENST00000609587 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
SMCHD1-213ENST00000609587 DNAH14Q0VDD8 3507 aa0.02□□□□□ -2.41
SMCHD1-213ENST00000609587 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
SMCHD1-213ENST00000609587 MT2AP02795 61 aa0.01□□□□□ -2.41
SMCHD1-213ENST00000609587 MT1MQ8N339 61 aa0.01□□□□□ -2.41
SMCHD1-213ENST00000609587 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
SMCHD1-213ENST00000609587 CDH23Q9H251 3354 aa-0.03□□□□□ -2.41
SMCHD1-213ENST00000609587 RNF213Q63HN8 5207 aa-0.03□□□□□ -2.41
SMCHD1-213ENST00000609587 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
SMCHD1-213ENST00000609587 KRTAP19-2Q3LHN2 52 aa-0.04□□□□□ -2.42
SMCHD1-213ENST00000609587 MT1BP07438 61 aa-0.06□□□□□ -2.42
SMCHD1-213ENST00000609587 MT1HL1P0DM35 61 aa-0.07□□□□□ -2.42
SMCHD1-213ENST00000609587 HTN3P15516 51 aa-0.07□□□□□ -2.42
SMCHD1-213ENST00000609587 MT4P47944 62 aa-0.11□□□□□ -2.43
SMCHD1-213ENST00000609587 KIAA1109Q2LD37 5005 aa-0.12□□□□□ -2.43
SMCHD1-213ENST00000609587 KRTAP20-2Q3LI61 65 aa-0.15□□□□□ -2.43
SMCHD1-213ENST00000609587 RYR2Q92736 4967 aa-0.16□□□□□ -2.43
SMCHD1-213ENST00000609587 MT1FP04733 61 aa-0.17□□□□□ -2.44
SMCHD1-213ENST00000609587 NEBP20929 6669 aa-0.21□□□□□ -2.44
SMCHD1-213ENST00000609587 ABCA13Q86UQ4 5058 aa-0.23□□□□□ -2.45
SMCHD1-213ENST00000609587 KRTAP20-1Q3LI63 56 aa-0.53□□□□□ -2.49
SMCHD1-213ENST00000609587 KRTAP19-6Q3LI70 58 aa-0.53□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms