RNA–Protein interactions for RNA: ENST00000609262.5

HNF4A-207, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-207ENST00000609262 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
HNF4A-207ENST00000609262 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
HNF4A-207ENST00000609262 ABCC9O60706 1549 aa39.01■■■■□ 3.84
HNF4A-207ENST00000609262 RB1CC1Q8TDY2 1594 aa37.29■■■■□ 3.56
HNF4A-207ENST00000609262 NACADO15069 1562 aa37.1■■■■□ 3.53
HNF4A-207ENST00000609262 DCAF8L2P0C7V8 631 aa36.84■■■■□ 3.49
HNF4A-207ENST00000609262 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
HNF4A-207ENST00000609262 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
HNF4A-207ENST00000609262 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
HNF4A-207ENST00000609262 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
HNF4A-207ENST00000609262 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
HNF4A-207ENST00000609262 DCAF1Q9Y4B6 1507 aa36.31■■■■□ 3.4
HNF4A-207ENST00000609262 BICRAQ9NZM4 1560 aa36.16■■■■□ 3.38
HNF4A-207ENST00000609262 SHROOM4Q9ULL8 1493 aa35.8■■■■□ 3.32
HNF4A-207ENST00000609262 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
HNF4A-207ENST00000609262 EIF4G1Q04637 1599 aaKnown RBP35.27■■■■□ 3.24
HNF4A-207ENST00000609262 CC2D2AQ9P2K1 1620 aa35.26■■■■□ 3.24
HNF4A-207ENST00000609262 CECR2Q9BXF3 1484 aa35.14■■■■□ 3.22
HNF4A-207ENST00000609262 NCAPD3P42695 1498 aa34.23■■■■□ 3.07
HNF4A-207ENST00000609262 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
HNF4A-207ENST00000609262 ATAD2BQ9ULI0 1458 aa34.16■■■■□ 3.06
HNF4A-207ENST00000609262 SMARCA2P51531 1590 aa34.1■■■■□ 3.05
HNF4A-207ENST00000609262 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.05
HNF4A-207ENST00000609262 HMGXB3Q12766 1538 aa34.03■■■■□ 3.04
HNF4A-207ENST00000609262 PEG3Q9GZU2 1588 aa33.88■■■■□ 3.01
HNF4A-207ENST00000609262 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
HNF4A-207ENST00000609262 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
HNF4A-207ENST00000609262 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
HNF4A-207ENST00000609262 NESP48681 1621 aa33.57■■■□□ 2.97
HNF4A-207ENST00000609262 CUX2O14529 1486 aa33.57■■■□□ 2.97
HNF4A-207ENST00000609262 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
HNF4A-207ENST00000609262 WIZO95785 1651 aa33.39■■■□□ 2.94
HNF4A-207ENST00000609262 THOC2Q8NI27 1593 aaKnown RBP33.23■■■□□ 2.91
HNF4A-207ENST00000609262 PDS5BQ9NTI5 1447 aa33.22■■■□□ 2.91
HNF4A-207ENST00000609262 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
HNF4A-207ENST00000609262 RSF1Q96T23 1441 aaPredicted RBP33.2■■■□□ 2.91
HNF4A-207ENST00000609262 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.9
HNF4A-207ENST00000609262 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
HNF4A-207ENST00000609262 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
HNF4A-207ENST00000609262 MRC2Q9UBG0 1479 aa32.93■■■□□ 2.86
HNF4A-207ENST00000609262 CFTRP13569 1480 aa32.88■■■□□ 2.85
HNF4A-207ENST00000609262 WDR62O43379 1518 aa32.85■■■□□ 2.85
HNF4A-207ENST00000609262 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
HNF4A-207ENST00000609262 FANCD2Q9BXW9 1451 aa32.82■■■□□ 2.84
HNF4A-207ENST00000609262 CCDC88BA6NC98 1476 aa32.63■■■□□ 2.81
HNF4A-207ENST00000609262 PRDM2Q13029 1718 aa32.55■■■□□ 2.8
HNF4A-207ENST00000609262 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
HNF4A-207ENST00000609262 TOPBP1Q92547 1522 aa32.23■■■□□ 2.75
HNF4A-207ENST00000609262 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
HNF4A-207ENST00000609262 IFT140Q96RY7 1462 aa32.19■■■□□ 2.74
HNF4A-207ENST00000609262 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
HNF4A-207ENST00000609262 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
HNF4A-207ENST00000609262 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
HNF4A-207ENST00000609262 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
HNF4A-207ENST00000609262 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
HNF4A-207ENST00000609262 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
HNF4A-207ENST00000609262 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
HNF4A-207ENST00000609262 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
HNF4A-207ENST00000609262 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.683e-9■■■■□ 19.9
HNF4A-207ENST00000609262 RAD54L2Q9Y4B4 1467 aa31.77■■■□□ 2.68
HNF4A-207ENST00000609262 SOGA1O94964 1423 aa31.75■■■□□ 2.67
HNF4A-207ENST00000609262 CUX1P39880 1505 aa31.75■■■□□ 2.67
HNF4A-207ENST00000609262 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
HNF4A-207ENST00000609262 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
HNF4A-207ENST00000609262 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
HNF4A-207ENST00000609262 CHD1O14646 1710 aa31.61■■■□□ 2.65
HNF4A-207ENST00000609262 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
HNF4A-207ENST00000609262 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
HNF4A-207ENST00000609262 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
HNF4A-207ENST00000609262 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
HNF4A-207ENST00000609262 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
HNF4A-207ENST00000609262 FBLN2P98095 1184 aa31.52■■■□□ 2.64
HNF4A-207ENST00000609262 GRIN2BQ13224 1484 aa31.48■■■□□ 2.63
HNF4A-207ENST00000609262 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
HNF4A-207ENST00000609262 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
HNF4A-207ENST00000609262 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
HNF4A-207ENST00000609262 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
HNF4A-207ENST00000609262 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
HNF4A-207ENST00000609262 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
HNF4A-207ENST00000609262 PBRM1Q86U86 1689 aa31.35■■■□□ 2.61
HNF4A-207ENST00000609262 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
HNF4A-207ENST00000609262 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
HNF4A-207ENST00000609262 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
HNF4A-207ENST00000609262 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
HNF4A-207ENST00000609262 CLASP1Q7Z460 1538 aa31.3■■■□□ 2.6
HNF4A-207ENST00000609262 ARAP1Q96P48 1450 aa31.25■■■□□ 2.59
HNF4A-207ENST00000609262 CYB5RLQ6IPT4 315 aa31.24■■■□□ 2.59
HNF4A-207ENST00000609262 ADAMTS12P58397 1594 aa31.1■■■□□ 2.57
HNF4A-207ENST00000609262 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
HNF4A-207ENST00000609262 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
HNF4A-207ENST00000609262 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
HNF4A-207ENST00000609262 NUP160Q12769 1436 aa30.98■■■□□ 2.55
HNF4A-207ENST00000609262 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
HNF4A-207ENST00000609262 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
HNF4A-207ENST00000609262 SHROOM2Q13796 1616 aa30.8■■■□□ 2.52
HNF4A-207ENST00000609262 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
HNF4A-207ENST00000609262 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
HNF4A-207ENST00000609262 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
HNF4A-207ENST00000609262 IGF1RP08069 1367 aa30.66■■■□□ 2.5
HNF4A-207ENST00000609262 CUL7Q14999 1698 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms