RNA–Protein interactions for RNA: ENST00000606873.1

SNAP47-212, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 2

Gene SNAP47, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-212ENST00000606873 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
SNAP47-212ENST00000606873 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
SNAP47-212ENST00000606873 ABCC9O60706 1549 aa25.58■■□□□ 1.69
SNAP47-212ENST00000606873 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
SNAP47-212ENST00000606873 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
SNAP47-212ENST00000606873 NACADO15069 1562 aa24.71■■□□□ 1.55
SNAP47-212ENST00000606873 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
SNAP47-212ENST00000606873 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
SNAP47-212ENST00000606873 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
SNAP47-212ENST00000606873 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
SNAP47-212ENST00000606873 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
SNAP47-212ENST00000606873 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
SNAP47-212ENST00000606873 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
SNAP47-212ENST00000606873 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
SNAP47-212ENST00000606873 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
SNAP47-212ENST00000606873 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
SNAP47-212ENST00000606873 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
SNAP47-212ENST00000606873 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
SNAP47-212ENST00000606873 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
SNAP47-212ENST00000606873 SMARCA4P51532 1647 aa23■■□□□ 1.27
SNAP47-212ENST00000606873 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
SNAP47-212ENST00000606873 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
SNAP47-212ENST00000606873 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
SNAP47-212ENST00000606873 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
SNAP47-212ENST00000606873 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
SNAP47-212ENST00000606873 WIZO95785 1651 aa22.68■■□□□ 1.22
SNAP47-212ENST00000606873 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
SNAP47-212ENST00000606873 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
SNAP47-212ENST00000606873 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
SNAP47-212ENST00000606873 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
SNAP47-212ENST00000606873 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
SNAP47-212ENST00000606873 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
SNAP47-212ENST00000606873 NESP48681 1621 aa22.15■■□□□ 1.14
SNAP47-212ENST00000606873 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
SNAP47-212ENST00000606873 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
SNAP47-212ENST00000606873 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
SNAP47-212ENST00000606873 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
SNAP47-212ENST00000606873 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
SNAP47-212ENST00000606873 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
SNAP47-212ENST00000606873 CFTRP13569 1480 aa21.98■■□□□ 1.11
SNAP47-212ENST00000606873 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
SNAP47-212ENST00000606873 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
SNAP47-212ENST00000606873 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
SNAP47-212ENST00000606873 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
SNAP47-212ENST00000606873 CUX2O14529 1486 aa21.74■■□□□ 1.07
SNAP47-212ENST00000606873 WDR62O43379 1518 aa21.66■■□□□ 1.06
SNAP47-212ENST00000606873 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
SNAP47-212ENST00000606873 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
SNAP47-212ENST00000606873 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SNAP47-212ENST00000606873 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
SNAP47-212ENST00000606873 CUX1P39880 1505 aa21.41■■□□□ 1.02
SNAP47-212ENST00000606873 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
SNAP47-212ENST00000606873 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
SNAP47-212ENST00000606873 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
SNAP47-212ENST00000606873 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
SNAP47-212ENST00000606873 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
SNAP47-212ENST00000606873 TOP2BQ02880 1626 aa21.33■■□□□ 1
SNAP47-212ENST00000606873 SOGA1O94964 1423 aa21.31■■□□□ 1
SNAP47-212ENST00000606873 SYNJ1O43426 1573 aa21.31■■□□□ 1
SNAP47-212ENST00000606873 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
SNAP47-212ENST00000606873 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
SNAP47-212ENST00000606873 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
SNAP47-212ENST00000606873 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
SNAP47-212ENST00000606873 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
SNAP47-212ENST00000606873 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
SNAP47-212ENST00000606873 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
SNAP47-212ENST00000606873 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
SNAP47-212ENST00000606873 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
SNAP47-212ENST00000606873 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
SNAP47-212ENST00000606873 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
SNAP47-212ENST00000606873 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
SNAP47-212ENST00000606873 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
SNAP47-212ENST00000606873 FBLN2P98095 1184 aa20.99■□□□□ 0.95
SNAP47-212ENST00000606873 CHD1O14646 1710 aa20.98■□□□□ 0.95
SNAP47-212ENST00000606873 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
SNAP47-212ENST00000606873 KIF27Q86VH2 1401 aa20.95■□□□□ 0.95
SNAP47-212ENST00000606873 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
SNAP47-212ENST00000606873 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
SNAP47-212ENST00000606873 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
SNAP47-212ENST00000606873 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
SNAP47-212ENST00000606873 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
SNAP47-212ENST00000606873 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
SNAP47-212ENST00000606873 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
SNAP47-212ENST00000606873 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
SNAP47-212ENST00000606873 CUL7Q14999 1698 aa20.83■□□□□ 0.92
SNAP47-212ENST00000606873 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
SNAP47-212ENST00000606873 IGF1RP08069 1367 aa20.76■□□□□ 0.91
SNAP47-212ENST00000606873 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
SNAP47-212ENST00000606873 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
SNAP47-212ENST00000606873 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SNAP47-212ENST00000606873 EEA1Q15075 1411 aa20.68■□□□□ 0.9
SNAP47-212ENST00000606873 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
SNAP47-212ENST00000606873 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
SNAP47-212ENST00000606873 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
SNAP47-212ENST00000606873 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
SNAP47-212ENST00000606873 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
SNAP47-212ENST00000606873 NUP160Q12769 1436 aa20.6■□□□□ 0.89
SNAP47-212ENST00000606873 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
SNAP47-212ENST00000606873 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
SNAP47-212ENST00000606873 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms