RNA–Protein interactions for RNA: ENST00000606212.1

AL390728.4-203, humanhuman

TSL 3

Gene AL390728.4, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-203ENST00000606212 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
AL390728.4-203ENST00000606212 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
AL390728.4-203ENST00000606212 ABCC9O60706 1549 aa28.69■■■□□ 2.18
AL390728.4-203ENST00000606212 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
AL390728.4-203ENST00000606212 NACADO15069 1562 aa27.33■■□□□ 1.97
AL390728.4-203ENST00000606212 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
AL390728.4-203ENST00000606212 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
AL390728.4-203ENST00000606212 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
AL390728.4-203ENST00000606212 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
AL390728.4-203ENST00000606212 DCAF8L2P0C7V8 631 aa27.14■■□□□ 1.94
AL390728.4-203ENST00000606212 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
AL390728.4-203ENST00000606212 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
AL390728.4-203ENST00000606212 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
AL390728.4-203ENST00000606212 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
AL390728.4-203ENST00000606212 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
AL390728.4-203ENST00000606212 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
AL390728.4-203ENST00000606212 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
AL390728.4-203ENST00000606212 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
AL390728.4-203ENST00000606212 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
AL390728.4-203ENST00000606212 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
AL390728.4-203ENST00000606212 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
AL390728.4-203ENST00000606212 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
AL390728.4-203ENST00000606212 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
AL390728.4-203ENST00000606212 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
AL390728.4-203ENST00000606212 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
AL390728.4-203ENST00000606212 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
AL390728.4-203ENST00000606212 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
AL390728.4-203ENST00000606212 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
AL390728.4-203ENST00000606212 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
AL390728.4-203ENST00000606212 CUX2O14529 1486 aa24.9■■□□□ 1.58
AL390728.4-203ENST00000606212 WIZO95785 1651 aa24.9■■□□□ 1.58
AL390728.4-203ENST00000606212 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
AL390728.4-203ENST00000606212 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
AL390728.4-203ENST00000606212 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
AL390728.4-203ENST00000606212 NESP48681 1621 aa24.52■■□□□ 1.52
AL390728.4-203ENST00000606212 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
AL390728.4-203ENST00000606212 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.5
AL390728.4-203ENST00000606212 CFTRP13569 1480 aa24.35■■□□□ 1.49
AL390728.4-203ENST00000606212 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
AL390728.4-203ENST00000606212 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
AL390728.4-203ENST00000606212 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
AL390728.4-203ENST00000606212 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
AL390728.4-203ENST00000606212 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
AL390728.4-203ENST00000606212 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
AL390728.4-203ENST00000606212 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
AL390728.4-203ENST00000606212 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
AL390728.4-203ENST00000606212 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
AL390728.4-203ENST00000606212 WDR62O43379 1518 aa24■■□□□ 1.43
AL390728.4-203ENST00000606212 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
AL390728.4-203ENST00000606212 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
AL390728.4-203ENST00000606212 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
AL390728.4-203ENST00000606212 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
AL390728.4-203ENST00000606212 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
AL390728.4-203ENST00000606212 CUX1P39880 1505 aa23.64■■□□□ 1.37
AL390728.4-203ENST00000606212 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
AL390728.4-203ENST00000606212 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
AL390728.4-203ENST00000606212 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
AL390728.4-203ENST00000606212 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
AL390728.4-203ENST00000606212 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
AL390728.4-203ENST00000606212 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
AL390728.4-203ENST00000606212 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
AL390728.4-203ENST00000606212 SOGA1O94964 1423 aa23.49■■□□□ 1.35
AL390728.4-203ENST00000606212 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
AL390728.4-203ENST00000606212 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
AL390728.4-203ENST00000606212 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
AL390728.4-203ENST00000606212 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
AL390728.4-203ENST00000606212 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
AL390728.4-203ENST00000606212 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
AL390728.4-203ENST00000606212 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
AL390728.4-203ENST00000606212 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
AL390728.4-203ENST00000606212 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
AL390728.4-203ENST00000606212 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.321e-167■■■■■ 182.3
AL390728.4-203ENST00000606212 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
AL390728.4-203ENST00000606212 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
AL390728.4-203ENST00000606212 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
AL390728.4-203ENST00000606212 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
AL390728.4-203ENST00000606212 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
AL390728.4-203ENST00000606212 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
AL390728.4-203ENST00000606212 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
AL390728.4-203ENST00000606212 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
AL390728.4-203ENST00000606212 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
AL390728.4-203ENST00000606212 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
AL390728.4-203ENST00000606212 CHD1O14646 1710 aa23.1■■□□□ 1.29
AL390728.4-203ENST00000606212 FBLN2P98095 1184 aa23.09■■□□□ 1.29
AL390728.4-203ENST00000606212 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
AL390728.4-203ENST00000606212 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
AL390728.4-203ENST00000606212 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
AL390728.4-203ENST00000606212 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
AL390728.4-203ENST00000606212 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
AL390728.4-203ENST00000606212 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
AL390728.4-203ENST00000606212 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
AL390728.4-203ENST00000606212 IGF1RP08069 1367 aa22.94■■□□□ 1.26
AL390728.4-203ENST00000606212 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
AL390728.4-203ENST00000606212 CUL7Q14999 1698 aa22.91■■□□□ 1.26
AL390728.4-203ENST00000606212 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
AL390728.4-203ENST00000606212 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
AL390728.4-203ENST00000606212 NUP160Q12769 1436 aa22.83■■□□□ 1.25
AL390728.4-203ENST00000606212 CARMIL1Q5VZK9 1371 aa22.81■■□□□ 1.24
AL390728.4-203ENST00000606212 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
AL390728.4-203ENST00000606212 EEA1Q15075 1411 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms