RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
FARP1-234ENST00000601361 ABCC9O60706 1549 aa20.53■□□□□ 0.88
FARP1-234ENST00000601361 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
FARP1-234ENST00000601361 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
FARP1-234ENST00000601361 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
FARP1-234ENST00000601361 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
FARP1-234ENST00000601361 NACADO15069 1562 aa19.21■□□□□ 0.67
FARP1-234ENST00000601361 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
FARP1-234ENST00000601361 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
FARP1-234ENST00000601361 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
FARP1-234ENST00000601361 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
FARP1-234ENST00000601361 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
FARP1-234ENST00000601361 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
FARP1-234ENST00000601361 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
FARP1-234ENST00000601361 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
FARP1-234ENST00000601361 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
FARP1-234ENST00000601361 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
FARP1-234ENST00000601361 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
FARP1-234ENST00000601361 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
FARP1-234ENST00000601361 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
FARP1-234ENST00000601361 CUX2O14529 1486 aa17.94■□□□□ 0.46
FARP1-234ENST00000601361 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
FARP1-234ENST00000601361 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
FARP1-234ENST00000601361 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
FARP1-234ENST00000601361 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
FARP1-234ENST00000601361 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
FARP1-234ENST00000601361 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
FARP1-234ENST00000601361 NESP48681 1621 aa17.56■□□□□ 0.4
FARP1-234ENST00000601361 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
FARP1-234ENST00000601361 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
FARP1-234ENST00000601361 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
FARP1-234ENST00000601361 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
FARP1-234ENST00000601361 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
FARP1-234ENST00000601361 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
FARP1-234ENST00000601361 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
FARP1-234ENST00000601361 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
FARP1-234ENST00000601361 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
FARP1-234ENST00000601361 WDR62O43379 1518 aa17.2■□□□□ 0.34
FARP1-234ENST00000601361 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
FARP1-234ENST00000601361 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
FARP1-234ENST00000601361 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
FARP1-234ENST00000601361 WIZO95785 1651 aa17.02■□□□□ 0.32
FARP1-234ENST00000601361 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
FARP1-234ENST00000601361 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
FARP1-234ENST00000601361 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
FARP1-234ENST00000601361 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
FARP1-234ENST00000601361 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
FARP1-234ENST00000601361 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
FARP1-234ENST00000601361 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
FARP1-234ENST00000601361 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
FARP1-234ENST00000601361 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
FARP1-234ENST00000601361 CFTRP13569 1480 aa16.85■□□□□ 0.29
FARP1-234ENST00000601361 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
FARP1-234ENST00000601361 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
FARP1-234ENST00000601361 CHD1O14646 1710 aa16.69■□□□□ 0.26
FARP1-234ENST00000601361 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
FARP1-234ENST00000601361 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
FARP1-234ENST00000601361 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
FARP1-234ENST00000601361 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
FARP1-234ENST00000601361 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
FARP1-234ENST00000601361 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
FARP1-234ENST00000601361 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
FARP1-234ENST00000601361 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
FARP1-234ENST00000601361 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
FARP1-234ENST00000601361 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
FARP1-234ENST00000601361 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.226e-15■■■□□ 15.7
FARP1-234ENST00000601361 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
FARP1-234ENST00000601361 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
FARP1-234ENST00000601361 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
FARP1-234ENST00000601361 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
FARP1-234ENST00000601361 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
FARP1-234ENST00000601361 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
FARP1-234ENST00000601361 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
FARP1-234ENST00000601361 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
FARP1-234ENST00000601361 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
FARP1-234ENST00000601361 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
FARP1-234ENST00000601361 FBLN2P98095 1184 aa16.25■□□□□ 0.19
FARP1-234ENST00000601361 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
FARP1-234ENST00000601361 SOGA1O94964 1423 aa16.21■□□□□ 0.19
FARP1-234ENST00000601361 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
FARP1-234ENST00000601361 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
FARP1-234ENST00000601361 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
FARP1-234ENST00000601361 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
FARP1-234ENST00000601361 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
FARP1-234ENST00000601361 CUX1P39880 1505 aa16.15■□□□□ 0.18
FARP1-234ENST00000601361 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
FARP1-234ENST00000601361 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
FARP1-234ENST00000601361 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
FARP1-234ENST00000601361 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
FARP1-234ENST00000601361 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
FARP1-234ENST00000601361 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
FARP1-234ENST00000601361 ADAMTS12P58397 1594 aa16■□□□□ 0.15
FARP1-234ENST00000601361 GRIN2AQ12879 1464 aa16■□□□□ 0.15
FARP1-234ENST00000601361 NUP160Q12769 1436 aa15.97■□□□□ 0.15
FARP1-234ENST00000601361 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
FARP1-234ENST00000601361 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
FARP1-234ENST00000601361 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
FARP1-234ENST00000601361 DIP2BQ9P265 1576 aa15.85■□□□□ 0.13
FARP1-234ENST00000601361 MAPKBP1O60336 1514 aa15.83■□□□□ 0.12
FARP1-234ENST00000601361 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms