RNA–Protein interactions for RNA: ENST00000600746.1

POLD1-211, Transcript of DNA polymerase delta 1, catalytic subunit, humanhuman

TSL 5

Gene POLD1, Length 999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1-211ENST00000600746 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
POLD1-211ENST00000600746 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
POLD1-211ENST00000600746 ABCC9O60706 1549 aa36.85■■■■□ 3.49
POLD1-211ENST00000600746 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
POLD1-211ENST00000600746 RB1CC1Q8TDY2 1594 aa35.42■■■■□ 3.26
POLD1-211ENST00000600746 NACADO15069 1562 aa35.39■■■■□ 3.26
POLD1-211ENST00000600746 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
POLD1-211ENST00000600746 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
POLD1-211ENST00000600746 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
POLD1-211ENST00000600746 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
POLD1-211ENST00000600746 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
POLD1-211ENST00000600746 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
POLD1-211ENST00000600746 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
POLD1-211ENST00000600746 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
POLD1-211ENST00000600746 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
POLD1-211ENST00000600746 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
POLD1-211ENST00000600746 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
POLD1-211ENST00000600746 CECR2Q9BXF3 1484 aa33.08■■■□□ 2.89
POLD1-211ENST00000600746 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
POLD1-211ENST00000600746 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
POLD1-211ENST00000600746 ATAD2BQ9ULI0 1458 aa32.71■■■□□ 2.83
POLD1-211ENST00000600746 MROH2BQ7Z745 1585 aa32.7■■■□□ 2.83
POLD1-211ENST00000600746 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
POLD1-211ENST00000600746 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
POLD1-211ENST00000600746 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
POLD1-211ENST00000600746 HMGXB3Q12766 1538 aa32.51■■■□□ 2.8
POLD1-211ENST00000600746 BAZ1BQ9UIG0 1483 aaKnown RBP32.46■■■□□ 2.79
POLD1-211ENST00000600746 WIZO95785 1651 aa32.37■■■□□ 2.77
POLD1-211ENST00000600746 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
POLD1-211ENST00000600746 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
POLD1-211ENST00000600746 NESP48681 1621 aa31.9■■■□□ 2.7
POLD1-211ENST00000600746 LAMC3Q9Y6N6 1575 aa31.79■■■□□ 2.68
POLD1-211ENST00000600746 ERCC6Q03468 1493 aa31.76■■■□□ 2.67
POLD1-211ENST00000600746 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
POLD1-211ENST00000600746 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
POLD1-211ENST00000600746 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
POLD1-211ENST00000600746 PDS5BQ9NTI5 1447 aa31.58■■■□□ 2.65
POLD1-211ENST00000600746 CFTRP13569 1480 aa31.54■■■□□ 2.64
POLD1-211ENST00000600746 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.64
POLD1-211ENST00000600746 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
POLD1-211ENST00000600746 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.61
POLD1-211ENST00000600746 CUX2O14529 1486 aa31.34■■■□□ 2.61
POLD1-211ENST00000600746 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
POLD1-211ENST00000600746 PRDM2Q13029 1718 aa31.3■■■□□ 2.6
POLD1-211ENST00000600746 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
POLD1-211ENST00000600746 WDR62O43379 1518 aa31.16■■■□□ 2.58
POLD1-211ENST00000600746 URB2Q14146 1524 aaKnown RBP31.07■■■□□ 2.56
POLD1-211ENST00000600746 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
POLD1-211ENST00000600746 DNMBPQ6XZF7 1577 aa30.85■■■□□ 2.53
POLD1-211ENST00000600746 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
POLD1-211ENST00000600746 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
POLD1-211ENST00000600746 CUX1P39880 1505 aa30.68■■■□□ 2.5
POLD1-211ENST00000600746 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
POLD1-211ENST00000600746 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
POLD1-211ENST00000600746 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
POLD1-211ENST00000600746 ZNF608Q9ULD9 1512 aaPredicted RBP30.54■■■□□ 2.48
POLD1-211ENST00000600746 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
POLD1-211ENST00000600746 RAD54L2Q9Y4B4 1467 aa30.51■■■□□ 2.48
POLD1-211ENST00000600746 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
POLD1-211ENST00000600746 SOGA1O94964 1423 aa30.49■■■□□ 2.47
POLD1-211ENST00000600746 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
POLD1-211ENST00000600746 EIF4G3O43432 1585 aaKnown RBP30.43■■■□□ 2.46
POLD1-211ENST00000600746 TOP2BQ02880 1626 aa30.42■■■□□ 2.46
POLD1-211ENST00000600746 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
POLD1-211ENST00000600746 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.451e-6■■■■□ 26.1
POLD1-211ENST00000600746 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
POLD1-211ENST00000600746 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
POLD1-211ENST00000600746 ABCA10Q8WWZ4 1543 aa30.26■■■□□ 2.43
POLD1-211ENST00000600746 GAPVD1Q14C86 1478 aa30.15■■■□□ 2.42
POLD1-211ENST00000600746 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.42
POLD1-211ENST00000600746 GRIN2BQ13224 1484 aa30.12■■■□□ 2.41
POLD1-211ENST00000600746 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
POLD1-211ENST00000600746 PBRM1Q86U86 1689 aa30.09■■■□□ 2.41
POLD1-211ENST00000600746 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
POLD1-211ENST00000600746 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
POLD1-211ENST00000600746 CHD1O14646 1710 aa30.02■■■□□ 2.4
POLD1-211ENST00000600746 FBLN2P98095 1184 aa30.01■■■□□ 2.39
POLD1-211ENST00000600746 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
POLD1-211ENST00000600746 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
POLD1-211ENST00000600746 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
POLD1-211ENST00000600746 ADAMTS12P58397 1594 aa29.87■■■□□ 2.37
POLD1-211ENST00000600746 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
POLD1-211ENST00000600746 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
POLD1-211ENST00000600746 FHAD1B1AJZ9 1412 aa29.79■■■□□ 2.36
POLD1-211ENST00000600746 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
POLD1-211ENST00000600746 IGF1RP08069 1367 aa29.71■■■□□ 2.35
POLD1-211ENST00000600746 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
POLD1-211ENST00000600746 CUL7Q14999 1698 aa29.64■■■□□ 2.34
POLD1-211ENST00000600746 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
POLD1-211ENST00000600746 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
POLD1-211ENST00000600746 NUP160Q12769 1436 aa29.61■■■□□ 2.33
POLD1-211ENST00000600746 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
POLD1-211ENST00000600746 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
POLD1-211ENST00000600746 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
POLD1-211ENST00000600746 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
POLD1-211ENST00000600746 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
POLD1-211ENST00000600746 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
POLD1-211ENST00000600746 RAPGEF2Q9Y4G8 1499 aa29.39■■■□□ 2.3
POLD1-211ENST00000600746 ARAP1Q96P48 1450 aa29.38■■■□□ 2.29
POLD1-211ENST00000600746 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms