RNA–Protein interactions for RNA: ENST00000600740.5

SMIM7-219, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-219ENST00000600740 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
SMIM7-219ENST00000600740 ABCC9O60706 1549 aa20.38■□□□□ 0.85
SMIM7-219ENST00000600740 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
SMIM7-219ENST00000600740 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
SMIM7-219ENST00000600740 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
SMIM7-219ENST00000600740 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
SMIM7-219ENST00000600740 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMIM7-219ENST00000600740 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
SMIM7-219ENST00000600740 NACADO15069 1562 aa18.55■□□□□ 0.56
SMIM7-219ENST00000600740 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
SMIM7-219ENST00000600740 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
SMIM7-219ENST00000600740 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
SMIM7-219ENST00000600740 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
SMIM7-219ENST00000600740 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
SMIM7-219ENST00000600740 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
SMIM7-219ENST00000600740 CUX2O14529 1486 aa17.96■□□□□ 0.47
SMIM7-219ENST00000600740 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
SMIM7-219ENST00000600740 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
SMIM7-219ENST00000600740 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
SMIM7-219ENST00000600740 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
SMIM7-219ENST00000600740 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
SMIM7-219ENST00000600740 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
SMIM7-219ENST00000600740 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
SMIM7-219ENST00000600740 NESP48681 1621 aa17.23■□□□□ 0.35
SMIM7-219ENST00000600740 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
SMIM7-219ENST00000600740 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
SMIM7-219ENST00000600740 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
SMIM7-219ENST00000600740 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
SMIM7-219ENST00000600740 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
SMIM7-219ENST00000600740 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
SMIM7-219ENST00000600740 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
SMIM7-219ENST00000600740 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
SMIM7-219ENST00000600740 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
SMIM7-219ENST00000600740 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
SMIM7-219ENST00000600740 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
SMIM7-219ENST00000600740 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
SMIM7-219ENST00000600740 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
SMIM7-219ENST00000600740 WDR62O43379 1518 aa16.78■□□□□ 0.28
SMIM7-219ENST00000600740 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
SMIM7-219ENST00000600740 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
SMIM7-219ENST00000600740 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
SMIM7-219ENST00000600740 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SMIM7-219ENST00000600740 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
SMIM7-219ENST00000600740 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
SMIM7-219ENST00000600740 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
SMIM7-219ENST00000600740 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
SMIM7-219ENST00000600740 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
SMIM7-219ENST00000600740 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
SMIM7-219ENST00000600740 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
SMIM7-219ENST00000600740 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
SMIM7-219ENST00000600740 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
SMIM7-219ENST00000600740 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
SMIM7-219ENST00000600740 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.19
SMIM7-219ENST00000600740 CHD1O14646 1710 aa16.26■□□□□ 0.19
SMIM7-219ENST00000600740 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
SMIM7-219ENST00000600740 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
SMIM7-219ENST00000600740 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
SMIM7-219ENST00000600740 CFTRP13569 1480 aa16.16■□□□□ 0.18
SMIM7-219ENST00000600740 FBLN2P98095 1184 aa16.07■□□□□ 0.16
SMIM7-219ENST00000600740 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
SMIM7-219ENST00000600740 WIZO95785 1651 aa16.02■□□□□ 0.16
SMIM7-219ENST00000600740 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
SMIM7-219ENST00000600740 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
SMIM7-219ENST00000600740 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
SMIM7-219ENST00000600740 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
SMIM7-219ENST00000600740 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
SMIM7-219ENST00000600740 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
SMIM7-219ENST00000600740 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
SMIM7-219ENST00000600740 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
SMIM7-219ENST00000600740 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
SMIM7-219ENST00000600740 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
SMIM7-219ENST00000600740 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
SMIM7-219ENST00000600740 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
SMIM7-219ENST00000600740 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
SMIM7-219ENST00000600740 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
SMIM7-219ENST00000600740 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
SMIM7-219ENST00000600740 FBXO41Q8TF61 875 aa15.74■□□□□ 0.11
SMIM7-219ENST00000600740 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
SMIM7-219ENST00000600740 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
SMIM7-219ENST00000600740 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
SMIM7-219ENST00000600740 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.1
SMIM7-219ENST00000600740 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
SMIM7-219ENST00000600740 KDM6BO15054 1643 aa15.68■□□□□ 0.1
SMIM7-219ENST00000600740 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
SMIM7-219ENST00000600740 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
SMIM7-219ENST00000600740 SOGA1O94964 1423 aa15.62■□□□□ 0.09
SMIM7-219ENST00000600740 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
SMIM7-219ENST00000600740 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
SMIM7-219ENST00000600740 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
SMIM7-219ENST00000600740 ABCC10Q5T3U5 1492 aa15.6■□□□□ 0.09
SMIM7-219ENST00000600740 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
SMIM7-219ENST00000600740 DIP2BQ9P265 1576 aa15.57■□□□□ 0.08
SMIM7-219ENST00000600740 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
SMIM7-219ENST00000600740 SOCS7O14512 581 aa15.55■□□□□ 0.08
SMIM7-219ENST00000600740 TSPOAP1O95153 1857 aa15.53■□□□□ 0.08
SMIM7-219ENST00000600740 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
SMIM7-219ENST00000600740 ILDR2Q71H61 639 aa15.5■□□□□ 0.07
SMIM7-219ENST00000600740 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
SMIM7-219ENST00000600740 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
SMIM7-219ENST00000600740 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms