RNA–Protein interactions for RNA: ENST00000600615.5

STRN4-219, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-219ENST00000600615 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
STRN4-219ENST00000600615 ABCC9O60706 1549 aa26.9■■□□□ 1.9
STRN4-219ENST00000600615 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
STRN4-219ENST00000600615 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
STRN4-219ENST00000600615 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
STRN4-219ENST00000600615 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.591e-8■□□□□ 9.8
STRN4-219ENST00000600615 NACADO15069 1562 aa24.71■■□□□ 1.55
STRN4-219ENST00000600615 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
STRN4-219ENST00000600615 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
STRN4-219ENST00000600615 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
STRN4-219ENST00000600615 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
STRN4-219ENST00000600615 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
STRN4-219ENST00000600615 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
STRN4-219ENST00000600615 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
STRN4-219ENST00000600615 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
STRN4-219ENST00000600615 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
STRN4-219ENST00000600615 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
STRN4-219ENST00000600615 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
STRN4-219ENST00000600615 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
STRN4-219ENST00000600615 CUX2O14529 1486 aa23.36■■□□□ 1.33
STRN4-219ENST00000600615 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
STRN4-219ENST00000600615 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
STRN4-219ENST00000600615 NESP48681 1621 aa22.9■■□□□ 1.26
STRN4-219ENST00000600615 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
STRN4-219ENST00000600615 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
STRN4-219ENST00000600615 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
STRN4-219ENST00000600615 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
STRN4-219ENST00000600615 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
STRN4-219ENST00000600615 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
STRN4-219ENST00000600615 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
STRN4-219ENST00000600615 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
STRN4-219ENST00000600615 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
STRN4-219ENST00000600615 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
STRN4-219ENST00000600615 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
STRN4-219ENST00000600615 MRC2Q9UBG0 1479 aa22.26■■□□□ 1.15
STRN4-219ENST00000600615 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
STRN4-219ENST00000600615 WDR62O43379 1518 aa22.21■■□□□ 1.15
STRN4-219ENST00000600615 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
STRN4-219ENST00000600615 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
STRN4-219ENST00000600615 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
STRN4-219ENST00000600615 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
STRN4-219ENST00000600615 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
STRN4-219ENST00000600615 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
STRN4-219ENST00000600615 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
STRN4-219ENST00000600615 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
STRN4-219ENST00000600615 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
STRN4-219ENST00000600615 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
STRN4-219ENST00000600615 WIZO95785 1651 aa21.91■■□□□ 1.1
STRN4-219ENST00000600615 ARHGEF11O15085 1522 aa21.89■■□□□ 1.09
STRN4-219ENST00000600615 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
STRN4-219ENST00000600615 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
STRN4-219ENST00000600615 URB2Q14146 1524 aaKnown RBP21.83■■□□□ 1.09
STRN4-219ENST00000600615 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
STRN4-219ENST00000600615 AEBP2Q6ZN18 517 aaPredicted RBP21.79■■□□□ 1.08
STRN4-219ENST00000600615 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
STRN4-219ENST00000600615 CFTRP13569 1480 aa21.72■■□□□ 1.07
STRN4-219ENST00000600615 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
STRN4-219ENST00000600615 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
STRN4-219ENST00000600615 FBLN2P98095 1184 aa21.51■■□□□ 1.03
STRN4-219ENST00000600615 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
STRN4-219ENST00000600615 CHD1O14646 1710 aa21.49■■□□□ 1.03
STRN4-219ENST00000600615 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
STRN4-219ENST00000600615 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.022e-8■■■■■ 39.1
STRN4-219ENST00000600615 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
STRN4-219ENST00000600615 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
STRN4-219ENST00000600615 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
STRN4-219ENST00000600615 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
STRN4-219ENST00000600615 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
STRN4-219ENST00000600615 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
STRN4-219ENST00000600615 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
STRN4-219ENST00000600615 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
STRN4-219ENST00000600615 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
STRN4-219ENST00000600615 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
STRN4-219ENST00000600615 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
STRN4-219ENST00000600615 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
STRN4-219ENST00000600615 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
STRN4-219ENST00000600615 SOGA1O94964 1423 aa21.07■□□□□ 0.96
STRN4-219ENST00000600615 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
STRN4-219ENST00000600615 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
STRN4-219ENST00000600615 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
STRN4-219ENST00000600615 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
STRN4-219ENST00000600615 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
STRN4-219ENST00000600615 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
STRN4-219ENST00000600615 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
STRN4-219ENST00000600615 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
STRN4-219ENST00000600615 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
STRN4-219ENST00000600615 CUX1P39880 1505 aa20.8■□□□□ 0.92
STRN4-219ENST00000600615 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
STRN4-219ENST00000600615 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
STRN4-219ENST00000600615 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
STRN4-219ENST00000600615 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
STRN4-219ENST00000600615 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
STRN4-219ENST00000600615 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
STRN4-219ENST00000600615 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
STRN4-219ENST00000600615 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
STRN4-219ENST00000600615 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
STRN4-219ENST00000600615 NUP160Q12769 1436 aa20.61■□□□□ 0.89
STRN4-219ENST00000600615 EEA1Q15075 1411 aa20.6■□□□□ 0.89
STRN4-219ENST00000600615 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
STRN4-219ENST00000600615 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms