RNA–Protein interactions for RNA: ENST00000600283.6

PGPEP1-208, Transcript of pyroglutamyl-peptidase I, humanhuman

TSL 1 (best)

Gene PGPEP1, Length 1,414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-208ENST00000600283 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
PGPEP1-208ENST00000600283 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
PGPEP1-208ENST00000600283 ABCC9O60706 1549 aa26.17■■□□□ 1.78
PGPEP1-208ENST00000600283 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
PGPEP1-208ENST00000600283 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
PGPEP1-208ENST00000600283 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
PGPEP1-208ENST00000600283 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
PGPEP1-208ENST00000600283 NACADO15069 1562 aa25.49■■□□□ 1.67
PGPEP1-208ENST00000600283 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
PGPEP1-208ENST00000600283 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
PGPEP1-208ENST00000600283 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
PGPEP1-208ENST00000600283 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
PGPEP1-208ENST00000600283 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
PGPEP1-208ENST00000600283 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
PGPEP1-208ENST00000600283 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
PGPEP1-208ENST00000600283 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
PGPEP1-208ENST00000600283 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
PGPEP1-208ENST00000600283 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
PGPEP1-208ENST00000600283 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
PGPEP1-208ENST00000600283 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
PGPEP1-208ENST00000600283 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
PGPEP1-208ENST00000600283 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
PGPEP1-208ENST00000600283 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
PGPEP1-208ENST00000600283 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
PGPEP1-208ENST00000600283 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
PGPEP1-208ENST00000600283 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
PGPEP1-208ENST00000600283 WIZO95785 1651 aa23.51■■□□□ 1.35
PGPEP1-208ENST00000600283 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
PGPEP1-208ENST00000600283 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
PGPEP1-208ENST00000600283 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
PGPEP1-208ENST00000600283 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
PGPEP1-208ENST00000600283 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
PGPEP1-208ENST00000600283 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
PGPEP1-208ENST00000600283 CFTRP13569 1480 aa22.85■■□□□ 1.25
PGPEP1-208ENST00000600283 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
PGPEP1-208ENST00000600283 NESP48681 1621 aa22.79■■□□□ 1.24
PGPEP1-208ENST00000600283 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
PGPEP1-208ENST00000600283 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PGPEP1-208ENST00000600283 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
PGPEP1-208ENST00000600283 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
PGPEP1-208ENST00000600283 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
PGPEP1-208ENST00000600283 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.19
PGPEP1-208ENST00000600283 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
PGPEP1-208ENST00000600283 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
PGPEP1-208ENST00000600283 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
PGPEP1-208ENST00000600283 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
PGPEP1-208ENST00000600283 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
PGPEP1-208ENST00000600283 CUX1P39880 1505 aa22.28■■□□□ 1.16
PGPEP1-208ENST00000600283 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
PGPEP1-208ENST00000600283 WDR62O43379 1518 aa22.28■■□□□ 1.16
PGPEP1-208ENST00000600283 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
PGPEP1-208ENST00000600283 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
PGPEP1-208ENST00000600283 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
PGPEP1-208ENST00000600283 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
PGPEP1-208ENST00000600283 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
PGPEP1-208ENST00000600283 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
PGPEP1-208ENST00000600283 CUX2O14529 1486 aa22.14■■□□□ 1.13
PGPEP1-208ENST00000600283 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
PGPEP1-208ENST00000600283 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
PGPEP1-208ENST00000600283 SOGA1O94964 1423 aa22.09■■□□□ 1.13
PGPEP1-208ENST00000600283 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
PGPEP1-208ENST00000600283 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
PGPEP1-208ENST00000600283 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
PGPEP1-208ENST00000600283 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
PGPEP1-208ENST00000600283 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
PGPEP1-208ENST00000600283 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
PGPEP1-208ENST00000600283 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
PGPEP1-208ENST00000600283 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
PGPEP1-208ENST00000600283 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.094e-9■■■■■ 54.5
PGPEP1-208ENST00000600283 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
PGPEP1-208ENST00000600283 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
PGPEP1-208ENST00000600283 RUSC2Q8N2Y8 1516 aa21.78■■□□□ 1.08
PGPEP1-208ENST00000600283 EEA1Q15075 1411 aa21.77■■□□□ 1.08
PGPEP1-208ENST00000600283 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
PGPEP1-208ENST00000600283 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
PGPEP1-208ENST00000600283 IGF1RP08069 1367 aa21.75■■□□□ 1.07
PGPEP1-208ENST00000600283 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
PGPEP1-208ENST00000600283 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
PGPEP1-208ENST00000600283 FAM9AQ8IZU1 332 aaPredicted RBP21.69■■□□□ 1.06
PGPEP1-208ENST00000600283 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
PGPEP1-208ENST00000600283 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
PGPEP1-208ENST00000600283 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
PGPEP1-208ENST00000600283 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
PGPEP1-208ENST00000600283 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
PGPEP1-208ENST00000600283 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
PGPEP1-208ENST00000600283 CUL7Q14999 1698 aa21.55■■□□□ 1.04
PGPEP1-208ENST00000600283 CHMP7Q8WUX9 453 aaPredicted RBP21.55■■□□□ 1.04
PGPEP1-208ENST00000600283 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
PGPEP1-208ENST00000600283 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
PGPEP1-208ENST00000600283 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
PGPEP1-208ENST00000600283 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PGPEP1-208ENST00000600283 GRIN2AQ12879 1464 aa21.45■■□□□ 1.03
PGPEP1-208ENST00000600283 KIF21BO75037 1637 aa21.43■■□□□ 1.02
PGPEP1-208ENST00000600283 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
PGPEP1-208ENST00000600283 CHD1O14646 1710 aa21.37■■□□□ 1.01
PGPEP1-208ENST00000600283 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
PGPEP1-208ENST00000600283 NUP160Q12769 1436 aa21.36■■□□□ 1.01
PGPEP1-208ENST00000600283 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
PGPEP1-208ENST00000600283 UBTFP17480 764 aaKnown RBP21.33■■□□□ 1.01
PGPEP1-208ENST00000600283 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms