RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
C19orf54-210ENST00000600139 ABCC9O60706 1549 aa20.3■□□□□ 0.84
C19orf54-210ENST00000600139 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
C19orf54-210ENST00000600139 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
C19orf54-210ENST00000600139 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
C19orf54-210ENST00000600139 NACADO15069 1562 aa19.14■□□□□ 0.65
C19orf54-210ENST00000600139 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
C19orf54-210ENST00000600139 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
C19orf54-210ENST00000600139 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
C19orf54-210ENST00000600139 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
C19orf54-210ENST00000600139 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
C19orf54-210ENST00000600139 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
C19orf54-210ENST00000600139 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
C19orf54-210ENST00000600139 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
C19orf54-210ENST00000600139 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
C19orf54-210ENST00000600139 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
C19orf54-210ENST00000600139 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
C19orf54-210ENST00000600139 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
C19orf54-210ENST00000600139 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
C19orf54-210ENST00000600139 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
C19orf54-210ENST00000600139 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
C19orf54-210ENST00000600139 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
C19orf54-210ENST00000600139 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
C19orf54-210ENST00000600139 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
C19orf54-210ENST00000600139 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
C19orf54-210ENST00000600139 CUX2O14529 1486 aa17.5■□□□□ 0.39
C19orf54-210ENST00000600139 NESP48681 1621 aa17.49■□□□□ 0.39
C19orf54-210ENST00000600139 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
C19orf54-210ENST00000600139 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
C19orf54-210ENST00000600139 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
C19orf54-210ENST00000600139 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
C19orf54-210ENST00000600139 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
C19orf54-210ENST00000600139 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
C19orf54-210ENST00000600139 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
C19orf54-210ENST00000600139 WIZO95785 1651 aa17.19■□□□□ 0.34
C19orf54-210ENST00000600139 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
C19orf54-210ENST00000600139 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
C19orf54-210ENST00000600139 WDR62O43379 1518 aa17.06■□□□□ 0.32
C19orf54-210ENST00000600139 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
C19orf54-210ENST00000600139 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
C19orf54-210ENST00000600139 CFTRP13569 1480 aa16.95■□□□□ 0.3
C19orf54-210ENST00000600139 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
C19orf54-210ENST00000600139 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
C19orf54-210ENST00000600139 CEP164Q9UPV0 1460 aa16.92■□□□□ 0.3
C19orf54-210ENST00000600139 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
C19orf54-210ENST00000600139 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
C19orf54-210ENST00000600139 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
C19orf54-210ENST00000600139 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
C19orf54-210ENST00000600139 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
C19orf54-210ENST00000600139 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
C19orf54-210ENST00000600139 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
C19orf54-210ENST00000600139 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
C19orf54-210ENST00000600139 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
C19orf54-210ENST00000600139 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
C19orf54-210ENST00000600139 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
C19orf54-210ENST00000600139 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
C19orf54-210ENST00000600139 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
C19orf54-210ENST00000600139 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
C19orf54-210ENST00000600139 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
C19orf54-210ENST00000600139 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
C19orf54-210ENST00000600139 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
C19orf54-210ENST00000600139 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.226e-6■■■■□ 25.1
C19orf54-210ENST00000600139 CHD1O14646 1710 aa16.45■□□□□ 0.22
C19orf54-210ENST00000600139 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
C19orf54-210ENST00000600139 CUX1P39880 1505 aa16.37■□□□□ 0.21
C19orf54-210ENST00000600139 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
C19orf54-210ENST00000600139 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
C19orf54-210ENST00000600139 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
C19orf54-210ENST00000600139 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
C19orf54-210ENST00000600139 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
C19orf54-210ENST00000600139 SOGA1O94964 1423 aa16.29■□□□□ 0.2
C19orf54-210ENST00000600139 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
C19orf54-210ENST00000600139 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
C19orf54-210ENST00000600139 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
C19orf54-210ENST00000600139 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
C19orf54-210ENST00000600139 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
C19orf54-210ENST00000600139 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
C19orf54-210ENST00000600139 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
C19orf54-210ENST00000600139 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
C19orf54-210ENST00000600139 FBLN2P98095 1184 aa16.15■□□□□ 0.18
C19orf54-210ENST00000600139 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
C19orf54-210ENST00000600139 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
C19orf54-210ENST00000600139 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.16
C19orf54-210ENST00000600139 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
C19orf54-210ENST00000600139 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
C19orf54-210ENST00000600139 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
C19orf54-210ENST00000600139 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
C19orf54-210ENST00000600139 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
C19orf54-210ENST00000600139 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
C19orf54-210ENST00000600139 NUP160Q12769 1436 aa16.02■□□□□ 0.15
C19orf54-210ENST00000600139 SHROOM2Q13796 1616 aa15.99■□□□□ 0.15
C19orf54-210ENST00000600139 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
C19orf54-210ENST00000600139 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
C19orf54-210ENST00000600139 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
C19orf54-210ENST00000600139 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
C19orf54-210ENST00000600139 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
C19orf54-210ENST00000600139 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
C19orf54-210ENST00000600139 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
C19orf54-210ENST00000600139 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.11
C19orf54-210ENST00000600139 IGF1RP08069 1367 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms