RNA–Protein interactions for RNA: ENST00000599685.5

PLD3-221, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-221ENST00000599685 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
PLD3-221ENST00000599685 CCDC180Q9P1Z9 1646 aa27.06■■□□□ 1.92
PLD3-221ENST00000599685 ABCC9O60706 1549 aa25.93■■□□□ 1.74
PLD3-221ENST00000599685 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
PLD3-221ENST00000599685 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
PLD3-221ENST00000599685 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
PLD3-221ENST00000599685 NACADO15069 1562 aa25.35■■□□□ 1.65
PLD3-221ENST00000599685 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
PLD3-221ENST00000599685 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PLD3-221ENST00000599685 SCRIBQ14160 1630 aa24.63■■□□□ 1.53
PLD3-221ENST00000599685 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
PLD3-221ENST00000599685 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
PLD3-221ENST00000599685 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PLD3-221ENST00000599685 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
PLD3-221ENST00000599685 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
PLD3-221ENST00000599685 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
PLD3-221ENST00000599685 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
PLD3-221ENST00000599685 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
PLD3-221ENST00000599685 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
PLD3-221ENST00000599685 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
PLD3-221ENST00000599685 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
PLD3-221ENST00000599685 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
PLD3-221ENST00000599685 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
PLD3-221ENST00000599685 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
PLD3-221ENST00000599685 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
PLD3-221ENST00000599685 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
PLD3-221ENST00000599685 WIZO95785 1651 aa23.32■■□□□ 1.32
PLD3-221ENST00000599685 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
PLD3-221ENST00000599685 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
PLD3-221ENST00000599685 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
PLD3-221ENST00000599685 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
PLD3-221ENST00000599685 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
PLD3-221ENST00000599685 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
PLD3-221ENST00000599685 CFTRP13569 1480 aa22.68■■□□□ 1.22
PLD3-221ENST00000599685 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
PLD3-221ENST00000599685 NESP48681 1621 aa22.57■■□□□ 1.2
PLD3-221ENST00000599685 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
PLD3-221ENST00000599685 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
PLD3-221ENST00000599685 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
PLD3-221ENST00000599685 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
PLD3-221ENST00000599685 CEP164Q9UPV0 1460 aa22.35■■□□□ 1.17
PLD3-221ENST00000599685 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
PLD3-221ENST00000599685 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
PLD3-221ENST00000599685 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
PLD3-221ENST00000599685 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
PLD3-221ENST00000599685 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
PLD3-221ENST00000599685 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
PLD3-221ENST00000599685 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
PLD3-221ENST00000599685 WDR62O43379 1518 aa22.14■■□□□ 1.13
PLD3-221ENST00000599685 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
PLD3-221ENST00000599685 CUX1P39880 1505 aa22.11■■□□□ 1.13
PLD3-221ENST00000599685 TOP2BQ02880 1626 aa22.08■■□□□ 1.13
PLD3-221ENST00000599685 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
PLD3-221ENST00000599685 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
PLD3-221ENST00000599685 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
PLD3-221ENST00000599685 CUX2O14529 1486 aa22.01■■□□□ 1.11
PLD3-221ENST00000599685 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
PLD3-221ENST00000599685 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
PLD3-221ENST00000599685 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
PLD3-221ENST00000599685 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
PLD3-221ENST00000599685 SOGA1O94964 1423 aa21.89■■□□□ 1.1
PLD3-221ENST00000599685 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.08
PLD3-221ENST00000599685 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
PLD3-221ENST00000599685 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
PLD3-221ENST00000599685 WDR97A6NE52 1622 aa21.77■■□□□ 1.08
PLD3-221ENST00000599685 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
PLD3-221ENST00000599685 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
PLD3-221ENST00000599685 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
PLD3-221ENST00000599685 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
PLD3-221ENST00000599685 EEA1Q15075 1411 aa21.65■■□□□ 1.06
PLD3-221ENST00000599685 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
PLD3-221ENST00000599685 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
PLD3-221ENST00000599685 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
PLD3-221ENST00000599685 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
PLD3-221ENST00000599685 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
PLD3-221ENST00000599685 IGF1RP08069 1367 aa21.54■■□□□ 1.04
PLD3-221ENST00000599685 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
PLD3-221ENST00000599685 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
PLD3-221ENST00000599685 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
PLD3-221ENST00000599685 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
PLD3-221ENST00000599685 CUL7Q14999 1698 aa21.46■■□□□ 1.03
PLD3-221ENST00000599685 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
PLD3-221ENST00000599685 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
PLD3-221ENST00000599685 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
PLD3-221ENST00000599685 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
PLD3-221ENST00000599685 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
PLD3-221ENST00000599685 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
PLD3-221ENST00000599685 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
PLD3-221ENST00000599685 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
PLD3-221ENST00000599685 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
PLD3-221ENST00000599685 KIF21BO75037 1637 aa21.33■■□□□ 1
PLD3-221ENST00000599685 GRIN2AQ12879 1464 aa21.3■■□□□ 1
PLD3-221ENST00000599685 FBLN2P98095 1184 aa21.27■■□□□ 1
PLD3-221ENST00000599685 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
PLD3-221ENST00000599685 CHD1O14646 1710 aa21.24■□□□□ 0.99
PLD3-221ENST00000599685 NUP160Q12769 1436 aa21.21■□□□□ 0.99
PLD3-221ENST00000599685 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
PLD3-221ENST00000599685 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.97
PLD3-221ENST00000599685 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
PLD3-221ENST00000599685 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms