RNA–Protein interactions for RNA: ENST00000599231.5

STRN4-217, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-217ENST00000599231 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
STRN4-217ENST00000599231 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
STRN4-217ENST00000599231 ABCC9O60706 1549 aa27.71■■■□□ 2.03
STRN4-217ENST00000599231 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
STRN4-217ENST00000599231 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
STRN4-217ENST00000599231 DNAJC5BQ9UF47 199 aa26.35■■□□□ 1.81
STRN4-217ENST00000599231 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
STRN4-217ENST00000599231 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.79
STRN4-217ENST00000599231 NACADO15069 1562 aa26.17■■□□□ 1.78
STRN4-217ENST00000599231 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
STRN4-217ENST00000599231 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
STRN4-217ENST00000599231 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
STRN4-217ENST00000599231 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
STRN4-217ENST00000599231 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
STRN4-217ENST00000599231 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
STRN4-217ENST00000599231 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
STRN4-217ENST00000599231 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
STRN4-217ENST00000599231 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
STRN4-217ENST00000599231 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
STRN4-217ENST00000599231 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
STRN4-217ENST00000599231 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
STRN4-217ENST00000599231 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
STRN4-217ENST00000599231 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
STRN4-217ENST00000599231 WIZO95785 1651 aa24.4■■□□□ 1.5
STRN4-217ENST00000599231 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
STRN4-217ENST00000599231 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
STRN4-217ENST00000599231 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
STRN4-217ENST00000599231 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
STRN4-217ENST00000599231 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
STRN4-217ENST00000599231 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
STRN4-217ENST00000599231 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
STRN4-217ENST00000599231 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
STRN4-217ENST00000599231 CUX2O14529 1486 aa23.98■■□□□ 1.43
STRN4-217ENST00000599231 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
STRN4-217ENST00000599231 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
STRN4-217ENST00000599231 NESP48681 1621 aa23.7■■□□□ 1.39
STRN4-217ENST00000599231 PRDM2Q13029 1718 aa23.49■■□□□ 1.35
STRN4-217ENST00000599231 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
STRN4-217ENST00000599231 CFTRP13569 1480 aa23.46■■□□□ 1.35
STRN4-217ENST00000599231 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
STRN4-217ENST00000599231 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
STRN4-217ENST00000599231 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
STRN4-217ENST00000599231 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
STRN4-217ENST00000599231 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
STRN4-217ENST00000599231 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
STRN4-217ENST00000599231 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
STRN4-217ENST00000599231 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
STRN4-217ENST00000599231 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
STRN4-217ENST00000599231 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
STRN4-217ENST00000599231 WDR62O43379 1518 aa23.08■■□□□ 1.29
STRN4-217ENST00000599231 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
STRN4-217ENST00000599231 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
STRN4-217ENST00000599231 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
STRN4-217ENST00000599231 CUX1P39880 1505 aa23.03■■□□□ 1.28
STRN4-217ENST00000599231 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
STRN4-217ENST00000599231 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
STRN4-217ENST00000599231 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
STRN4-217ENST00000599231 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
STRN4-217ENST00000599231 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
STRN4-217ENST00000599231 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
STRN4-217ENST00000599231 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
STRN4-217ENST00000599231 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
STRN4-217ENST00000599231 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
STRN4-217ENST00000599231 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
STRN4-217ENST00000599231 SOGA1O94964 1423 aa22.64■■□□□ 1.21
STRN4-217ENST00000599231 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
STRN4-217ENST00000599231 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
STRN4-217ENST00000599231 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
STRN4-217ENST00000599231 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
STRN4-217ENST00000599231 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
STRN4-217ENST00000599231 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
STRN4-217ENST00000599231 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
STRN4-217ENST00000599231 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
STRN4-217ENST00000599231 EEA1Q15075 1411 aa22.53■■□□□ 1.2
STRN4-217ENST00000599231 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
STRN4-217ENST00000599231 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
STRN4-217ENST00000599231 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
STRN4-217ENST00000599231 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
STRN4-217ENST00000599231 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
STRN4-217ENST00000599231 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
STRN4-217ENST00000599231 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
STRN4-217ENST00000599231 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
STRN4-217ENST00000599231 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.182e-7■■■■■ 42.8
STRN4-217ENST00000599231 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
STRN4-217ENST00000599231 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
STRN4-217ENST00000599231 KIF21BO75037 1637 aa22.35■■□□□ 1.17
STRN4-217ENST00000599231 CUL7Q14999 1698 aa22.34■■□□□ 1.17
STRN4-217ENST00000599231 IGF1RP08069 1367 aa22.33■■□□□ 1.17
STRN4-217ENST00000599231 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
STRN4-217ENST00000599231 FBLN2P98095 1184 aa22.29■■□□□ 1.16
STRN4-217ENST00000599231 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
STRN4-217ENST00000599231 CHD1O14646 1710 aa22.28■■□□□ 1.16
STRN4-217ENST00000599231 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
STRN4-217ENST00000599231 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
STRN4-217ENST00000599231 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
STRN4-217ENST00000599231 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
STRN4-217ENST00000599231 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
STRN4-217ENST00000599231 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
STRN4-217ENST00000599231 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
STRN4-217ENST00000599231 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms