RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
TRPM4-211ENST00000598697 PELP1Q8IZL8 1130 aaKnown RBP26.48■■□□□ 1.83
TRPM4-211ENST00000598697 HRCP23327 699 aa25.84■■□□□ 1.73
TRPM4-211ENST00000598697 MYT1Q01538 1121 aa25.73■■□□□ 1.71
TRPM4-211ENST00000598697 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
TRPM4-211ENST00000598697 PPARGC1BQ86YN6 1023 aaKnown RBP25.52■■□□□ 1.68
TRPM4-211ENST00000598697 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
TRPM4-211ENST00000598697 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
TRPM4-211ENST00000598697 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
TRPM4-211ENST00000598697 SCAF1Q9H7N4 1312 aaKnown RBP25.12■■□□□ 1.61
TRPM4-211ENST00000598697 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
TRPM4-211ENST00000598697 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
TRPM4-211ENST00000598697 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
TRPM4-211ENST00000598697 ABCC9O60706 1549 aa24.45■■□□□ 1.5
TRPM4-211ENST00000598697 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
TRPM4-211ENST00000598697 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
TRPM4-211ENST00000598697 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
TRPM4-211ENST00000598697 ACIN1Q9UKV3 1341 aaKnown RBP24.15■■□□□ 1.46
TRPM4-211ENST00000598697 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
TRPM4-211ENST00000598697 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
TRPM4-211ENST00000598697 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
TRPM4-211ENST00000598697 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
TRPM4-211ENST00000598697 PRKCSHP14314 528 aaPredicted RBP23.97■■□□□ 1.43
TRPM4-211ENST00000598697 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
TRPM4-211ENST00000598697 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
TRPM4-211ENST00000598697 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
TRPM4-211ENST00000598697 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.42
TRPM4-211ENST00000598697 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
TRPM4-211ENST00000598697 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
TRPM4-211ENST00000598697 NACADO15069 1562 aa23.63■■□□□ 1.37
TRPM4-211ENST00000598697 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
TRPM4-211ENST00000598697 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
TRPM4-211ENST00000598697 ANP32EQ9BTT0 268 aa23.37■■□□□ 1.33
TRPM4-211ENST00000598697 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
TRPM4-211ENST00000598697 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
TRPM4-211ENST00000598697 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
TRPM4-211ENST00000598697 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
TRPM4-211ENST00000598697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
TRPM4-211ENST00000598697 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
TRPM4-211ENST00000598697 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
TRPM4-211ENST00000598697 CCER1Q8TC90 406 aaPredicted RBP23.14■■□□□ 1.3
TRPM4-211ENST00000598697 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
TRPM4-211ENST00000598697 APLP2Q06481 763 aa22.98■■□□□ 1.27
TRPM4-211ENST00000598697 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
TRPM4-211ENST00000598697 WIZO95785 1651 aa22.93■■□□□ 1.26
TRPM4-211ENST00000598697 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
TRPM4-211ENST00000598697 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
TRPM4-211ENST00000598697 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
TRPM4-211ENST00000598697 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
TRPM4-211ENST00000598697 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
TRPM4-211ENST00000598697 MIER1Q8N108 512 aa22.67■■□□□ 1.22
TRPM4-211ENST00000598697 ANO8Q9HCE9 1232 aaPredicted RBP22.61■■□□□ 1.21
TRPM4-211ENST00000598697 SUPT16HQ9Y5B9 1047 aaKnown RBP22.6■■□□□ 1.21
TRPM4-211ENST00000598697 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
TRPM4-211ENST00000598697 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
TRPM4-211ENST00000598697 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
TRPM4-211ENST00000598697 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
TRPM4-211ENST00000598697 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
TRPM4-211ENST00000598697 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.17
TRPM4-211ENST00000598697 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.17
TRPM4-211ENST00000598697 BCANQ96GW7 911 aa22.3■■□□□ 1.16
TRPM4-211ENST00000598697 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
TRPM4-211ENST00000598697 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
TRPM4-211ENST00000598697 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
TRPM4-211ENST00000598697 RBM19Q9Y4C8 960 aaKnown RBP22.2■■□□□ 1.14
TRPM4-211ENST00000598697 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
TRPM4-211ENST00000598697 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
TRPM4-211ENST00000598697 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
TRPM4-211ENST00000598697 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
TRPM4-211ENST00000598697 MSH5O43196 834 aa22.06■■□□□ 1.12
TRPM4-211ENST00000598697 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
TRPM4-211ENST00000598697 SOGA1O94964 1423 aa22.05■■□□□ 1.12
TRPM4-211ENST00000598697 UBE2Q2Q8WVN8 375 aa22.05■■□□□ 1.12
TRPM4-211ENST00000598697 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
TRPM4-211ENST00000598697 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
TRPM4-211ENST00000598697 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
TRPM4-211ENST00000598697 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
TRPM4-211ENST00000598697 EIF5BO60841 1220 aaKnown RBP21.95■■□□□ 1.1
TRPM4-211ENST00000598697 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
TRPM4-211ENST00000598697 FKBP8Q14318 412 aa21.93■■□□□ 1.1
TRPM4-211ENST00000598697 KCNH8Q96L42 1107 aa21.92■■□□□ 1.1
TRPM4-211ENST00000598697 ITGAEP38570 1179 aa21.89■■□□□ 1.1
TRPM4-211ENST00000598697 MYT1LQ9UL68 1186 aa21.86■■□□□ 1.09
TRPM4-211ENST00000598697 RTN4Q9NQC3 1192 aaKnown RBP21.85■■□□□ 1.09
TRPM4-211ENST00000598697 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
TRPM4-211ENST00000598697 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
TRPM4-211ENST00000598697 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.08
TRPM4-211ENST00000598697 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
TRPM4-211ENST00000598697 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
TRPM4-211ENST00000598697 NEFLP07196 543 aa21.72■■□□□ 1.07
TRPM4-211ENST00000598697 NBR1Q14596 966 aa21.72■■□□□ 1.07
TRPM4-211ENST00000598697 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
TRPM4-211ENST00000598697 PKNOX2Q96KN3 472 aa21.68■■□□□ 1.06
TRPM4-211ENST00000598697 IL27Q8NEV9 243 aa21.67■■□□□ 1.06
TRPM4-211ENST00000598697 CEP162Q5TB80 1403 aa21.64■■□□□ 1.06
TRPM4-211ENST00000598697 EEA1Q15075 1411 aa21.64■■□□□ 1.05
TRPM4-211ENST00000598697 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
TRPM4-211ENST00000598697 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
TRPM4-211ENST00000598697 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
TRPM4-211ENST00000598697 CFTRP13569 1480 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms