RNA–Protein interactions for RNA: ENST00000598399.1

RPS19-204, Transcript of ribosomal protein S19, humanhuman

TSL 5

Gene RPS19, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS19-204ENST00000598399 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
RPS19-204ENST00000598399 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
RPS19-204ENST00000598399 ABCC9O60706 1549 aa28.94■■■□□ 2.22
RPS19-204ENST00000598399 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
RPS19-204ENST00000598399 NACADO15069 1562 aa27.55■■■□□ 2
RPS19-204ENST00000598399 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
RPS19-204ENST00000598399 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
RPS19-204ENST00000598399 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
RPS19-204ENST00000598399 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
RPS19-204ENST00000598399 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
RPS19-204ENST00000598399 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
RPS19-204ENST00000598399 DNAJC5BQ9UF47 199 aa26.96■■□□□ 1.91
RPS19-204ENST00000598399 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
RPS19-204ENST00000598399 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
RPS19-204ENST00000598399 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.85
RPS19-204ENST00000598399 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
RPS19-204ENST00000598399 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
RPS19-204ENST00000598399 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
RPS19-204ENST00000598399 SMARCA4P51532 1647 aa25.45■■□□□ 1.67
RPS19-204ENST00000598399 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
RPS19-204ENST00000598399 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
RPS19-204ENST00000598399 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
RPS19-204ENST00000598399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
RPS19-204ENST00000598399 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
RPS19-204ENST00000598399 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
RPS19-204ENST00000598399 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
RPS19-204ENST00000598399 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
RPS19-204ENST00000598399 NESP48681 1621 aa24.97■■□□□ 1.59
RPS19-204ENST00000598399 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
RPS19-204ENST00000598399 WIZO95785 1651 aa24.88■■□□□ 1.57
RPS19-204ENST00000598399 CUX2O14529 1486 aa24.88■■□□□ 1.57
RPS19-204ENST00000598399 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
RPS19-204ENST00000598399 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
RPS19-204ENST00000598399 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
RPS19-204ENST00000598399 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
RPS19-204ENST00000598399 CADPSQ9ULU8 1353 aa24.61■■□□□ 1.53
RPS19-204ENST00000598399 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
RPS19-204ENST00000598399 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
RPS19-204ENST00000598399 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
RPS19-204ENST00000598399 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
RPS19-204ENST00000598399 WDR62O43379 1518 aa24.43■■□□□ 1.5
RPS19-204ENST00000598399 CFTRP13569 1480 aa24.43■■□□□ 1.5
RPS19-204ENST00000598399 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
RPS19-204ENST00000598399 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
RPS19-204ENST00000598399 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
RPS19-204ENST00000598399 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
RPS19-204ENST00000598399 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.46
RPS19-204ENST00000598399 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
RPS19-204ENST00000598399 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
RPS19-204ENST00000598399 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
RPS19-204ENST00000598399 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
RPS19-204ENST00000598399 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
RPS19-204ENST00000598399 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
RPS19-204ENST00000598399 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
RPS19-204ENST00000598399 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
RPS19-204ENST00000598399 CUX1P39880 1505 aa23.64■■□□□ 1.37
RPS19-204ENST00000598399 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
RPS19-204ENST00000598399 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.374e-13■■■■■ 41.3
RPS19-204ENST00000598399 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
RPS19-204ENST00000598399 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
RPS19-204ENST00000598399 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
RPS19-204ENST00000598399 CHD1O14646 1710 aa23.55■■□□□ 1.36
RPS19-204ENST00000598399 SOGA1O94964 1423 aa23.53■■□□□ 1.36
RPS19-204ENST00000598399 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
RPS19-204ENST00000598399 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
RPS19-204ENST00000598399 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
RPS19-204ENST00000598399 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
RPS19-204ENST00000598399 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
RPS19-204ENST00000598399 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
RPS19-204ENST00000598399 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
RPS19-204ENST00000598399 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
RPS19-204ENST00000598399 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
RPS19-204ENST00000598399 ABCA5Q8WWZ7 1642 aa23.36■■□□□ 1.33
RPS19-204ENST00000598399 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
RPS19-204ENST00000598399 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
RPS19-204ENST00000598399 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
RPS19-204ENST00000598399 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
RPS19-204ENST00000598399 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
RPS19-204ENST00000598399 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
RPS19-204ENST00000598399 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
RPS19-204ENST00000598399 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
RPS19-204ENST00000598399 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
RPS19-204ENST00000598399 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
RPS19-204ENST00000598399 FBLN2P98095 1184 aa23.24■■□□□ 1.31
RPS19-204ENST00000598399 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
RPS19-204ENST00000598399 ADAMTS12P58397 1594 aa23.15■■□□□ 1.3
RPS19-204ENST00000598399 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
RPS19-204ENST00000598399 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
RPS19-204ENST00000598399 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
RPS19-204ENST00000598399 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
RPS19-204ENST00000598399 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
RPS19-204ENST00000598399 NUP160Q12769 1436 aa23.01■■□□□ 1.27
RPS19-204ENST00000598399 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
RPS19-204ENST00000598399 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
RPS19-204ENST00000598399 ERCC6L2Q5T890 1561 aa22.94■■□□□ 1.26
RPS19-204ENST00000598399 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
RPS19-204ENST00000598399 CUL7Q14999 1698 aa22.78■■□□□ 1.24
RPS19-204ENST00000598399 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
RPS19-204ENST00000598399 IGF1RP08069 1367 aa22.75■■□□□ 1.23
RPS19-204ENST00000598399 PRG4Q92954 1404 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms