RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
SMIM7-216ENST00000598278 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
SMIM7-216ENST00000598278 ABCC9O60706 1549 aa22.82■■□□□ 1.24
SMIM7-216ENST00000598278 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
SMIM7-216ENST00000598278 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
SMIM7-216ENST00000598278 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
SMIM7-216ENST00000598278 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SMIM7-216ENST00000598278 NACADO15069 1562 aa22.29■■□□□ 1.16
SMIM7-216ENST00000598278 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
SMIM7-216ENST00000598278 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
SMIM7-216ENST00000598278 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
SMIM7-216ENST00000598278 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
SMIM7-216ENST00000598278 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
SMIM7-216ENST00000598278 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMIM7-216ENST00000598278 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
SMIM7-216ENST00000598278 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
SMIM7-216ENST00000598278 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
SMIM7-216ENST00000598278 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
SMIM7-216ENST00000598278 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
SMIM7-216ENST00000598278 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
SMIM7-216ENST00000598278 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
SMIM7-216ENST00000598278 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
SMIM7-216ENST00000598278 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
SMIM7-216ENST00000598278 WIZO95785 1651 aa20.61■□□□□ 0.89
SMIM7-216ENST00000598278 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
SMIM7-216ENST00000598278 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
SMIM7-216ENST00000598278 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
SMIM7-216ENST00000598278 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
SMIM7-216ENST00000598278 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
SMIM7-216ENST00000598278 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
SMIM7-216ENST00000598278 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
SMIM7-216ENST00000598278 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
SMIM7-216ENST00000598278 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
SMIM7-216ENST00000598278 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
SMIM7-216ENST00000598278 CFTRP13569 1480 aa19.94■□□□□ 0.78
SMIM7-216ENST00000598278 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
SMIM7-216ENST00000598278 NESP48681 1621 aa19.87■□□□□ 0.77
SMIM7-216ENST00000598278 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
SMIM7-216ENST00000598278 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
SMIM7-216ENST00000598278 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
SMIM7-216ENST00000598278 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
SMIM7-216ENST00000598278 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
SMIM7-216ENST00000598278 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
SMIM7-216ENST00000598278 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
SMIM7-216ENST00000598278 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
SMIM7-216ENST00000598278 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
SMIM7-216ENST00000598278 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
SMIM7-216ENST00000598278 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
SMIM7-216ENST00000598278 CUX1P39880 1505 aa19.48■□□□□ 0.71
SMIM7-216ENST00000598278 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
SMIM7-216ENST00000598278 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
SMIM7-216ENST00000598278 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
SMIM7-216ENST00000598278 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
SMIM7-216ENST00000598278 WDR62O43379 1518 aa19.46■□□□□ 0.71
SMIM7-216ENST00000598278 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
SMIM7-216ENST00000598278 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
SMIM7-216ENST00000598278 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
SMIM7-216ENST00000598278 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
SMIM7-216ENST00000598278 CUX2O14529 1486 aa19.31■□□□□ 0.68
SMIM7-216ENST00000598278 SOGA1O94964 1423 aa19.28■□□□□ 0.68
SMIM7-216ENST00000598278 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
SMIM7-216ENST00000598278 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
SMIM7-216ENST00000598278 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
SMIM7-216ENST00000598278 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
SMIM7-216ENST00000598278 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
SMIM7-216ENST00000598278 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
SMIM7-216ENST00000598278 EEA1Q15075 1411 aa19.09■□□□□ 0.65
SMIM7-216ENST00000598278 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
SMIM7-216ENST00000598278 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
SMIM7-216ENST00000598278 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
SMIM7-216ENST00000598278 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
SMIM7-216ENST00000598278 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SMIM7-216ENST00000598278 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMIM7-216ENST00000598278 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
SMIM7-216ENST00000598278 PBRM1Q86U86 1689 aa19.02■□□□□ 0.64
SMIM7-216ENST00000598278 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
SMIM7-216ENST00000598278 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
SMIM7-216ENST00000598278 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
SMIM7-216ENST00000598278 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
SMIM7-216ENST00000598278 IGF1RP08069 1367 aa18.96■□□□□ 0.63
SMIM7-216ENST00000598278 CUL7Q14999 1698 aa18.94■□□□□ 0.62
SMIM7-216ENST00000598278 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
SMIM7-216ENST00000598278 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
SMIM7-216ENST00000598278 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
SMIM7-216ENST00000598278 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
SMIM7-216ENST00000598278 ADAMTS12P58397 1594 aa18.87■□□□□ 0.61
SMIM7-216ENST00000598278 KIF21BO75037 1637 aa18.84■□□□□ 0.61
SMIM7-216ENST00000598278 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
SMIM7-216ENST00000598278 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
SMIM7-216ENST00000598278 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.6
SMIM7-216ENST00000598278 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
SMIM7-216ENST00000598278 FBLN2P98095 1184 aa18.77■□□□□ 0.6
SMIM7-216ENST00000598278 GOLGA3Q08378 1498 aa18.77■□□□□ 0.59
SMIM7-216ENST00000598278 CHD1O14646 1710 aa18.76■□□□□ 0.59
SMIM7-216ENST00000598278 GRIN2AQ12879 1464 aa18.75■□□□□ 0.59
SMIM7-216ENST00000598278 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
SMIM7-216ENST00000598278 UBTFP17480 764 aaKnown RBP18.69■□□□□ 0.58
SMIM7-216ENST00000598278 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
SMIM7-216ENST00000598278 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
SMIM7-216ENST00000598278 NUP160Q12769 1436 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms