RNA–Protein interactions for RNA: ENST00000597781.5

SMIM7-215, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-215ENST00000597781 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
SMIM7-215ENST00000597781 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
SMIM7-215ENST00000597781 ABCC9O60706 1549 aa15.51■□□□□ 0.07
SMIM7-215ENST00000597781 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
SMIM7-215ENST00000597781 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
SMIM7-215ENST00000597781 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
SMIM7-215ENST00000597781 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
SMIM7-215ENST00000597781 NACADO15069 1562 aa15.04■□□□□ -0
SMIM7-215ENST00000597781 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
SMIM7-215ENST00000597781 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
SMIM7-215ENST00000597781 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMIM7-215ENST00000597781 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
SMIM7-215ENST00000597781 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
SMIM7-215ENST00000597781 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
SMIM7-215ENST00000597781 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
SMIM7-215ENST00000597781 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
SMIM7-215ENST00000597781 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
SMIM7-215ENST00000597781 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
SMIM7-215ENST00000597781 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
SMIM7-215ENST00000597781 SMARCA4P51532 1647 aa14□□□□□ -0.17
SMIM7-215ENST00000597781 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
SMIM7-215ENST00000597781 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
SMIM7-215ENST00000597781 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
SMIM7-215ENST00000597781 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
SMIM7-215ENST00000597781 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
SMIM7-215ENST00000597781 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
SMIM7-215ENST00000597781 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
SMIM7-215ENST00000597781 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
SMIM7-215ENST00000597781 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
SMIM7-215ENST00000597781 WIZO95785 1651 aa13.78□□□□□ -0.2
SMIM7-215ENST00000597781 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
SMIM7-215ENST00000597781 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
SMIM7-215ENST00000597781 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
SMIM7-215ENST00000597781 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
SMIM7-215ENST00000597781 CFTRP13569 1480 aa13.48□□□□□ -0.25
SMIM7-215ENST00000597781 NESP48681 1621 aa13.46□□□□□ -0.25
SMIM7-215ENST00000597781 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
SMIM7-215ENST00000597781 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
SMIM7-215ENST00000597781 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
SMIM7-215ENST00000597781 FANCD2Q9BXW9 1451 aa13.35□□□□□ -0.27
SMIM7-215ENST00000597781 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
SMIM7-215ENST00000597781 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
SMIM7-215ENST00000597781 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.29
SMIM7-215ENST00000597781 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
SMIM7-215ENST00000597781 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
SMIM7-215ENST00000597781 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
SMIM7-215ENST00000597781 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
SMIM7-215ENST00000597781 WDR62O43379 1518 aa13.17□□□□□ -0.3
SMIM7-215ENST00000597781 CUX2O14529 1486 aa13.16□□□□□ -0.3
SMIM7-215ENST00000597781 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
SMIM7-215ENST00000597781 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
SMIM7-215ENST00000597781 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SMIM7-215ENST00000597781 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
SMIM7-215ENST00000597781 CUX1P39880 1505 aa13.1□□□□□ -0.31
SMIM7-215ENST00000597781 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
SMIM7-215ENST00000597781 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
SMIM7-215ENST00000597781 SOGA1O94964 1423 aa13.04□□□□□ -0.32
SMIM7-215ENST00000597781 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
SMIM7-215ENST00000597781 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
SMIM7-215ENST00000597781 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
SMIM7-215ENST00000597781 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
SMIM7-215ENST00000597781 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
SMIM7-215ENST00000597781 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SMIM7-215ENST00000597781 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
SMIM7-215ENST00000597781 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
SMIM7-215ENST00000597781 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
SMIM7-215ENST00000597781 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
SMIM7-215ENST00000597781 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
SMIM7-215ENST00000597781 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMIM7-215ENST00000597781 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
SMIM7-215ENST00000597781 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
SMIM7-215ENST00000597781 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
SMIM7-215ENST00000597781 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
SMIM7-215ENST00000597781 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
SMIM7-215ENST00000597781 IGF1RP08069 1367 aa12.81□□□□□ -0.36
SMIM7-215ENST00000597781 ABCA5Q8WWZ7 1642 aa12.8□□□□□ -0.36
SMIM7-215ENST00000597781 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
SMIM7-215ENST00000597781 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
SMIM7-215ENST00000597781 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
SMIM7-215ENST00000597781 EEA1Q15075 1411 aa12.76□□□□□ -0.37
SMIM7-215ENST00000597781 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
SMIM7-215ENST00000597781 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
SMIM7-215ENST00000597781 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
SMIM7-215ENST00000597781 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
SMIM7-215ENST00000597781 FBLN2P98095 1184 aa12.73□□□□□ -0.37
SMIM7-215ENST00000597781 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
SMIM7-215ENST00000597781 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
SMIM7-215ENST00000597781 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
SMIM7-215ENST00000597781 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
SMIM7-215ENST00000597781 PBRM1Q86U86 1689 aa12.68□□□□□ -0.38
SMIM7-215ENST00000597781 ADAMTS12P58397 1594 aa12.68□□□□□ -0.38
SMIM7-215ENST00000597781 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
SMIM7-215ENST00000597781 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
SMIM7-215ENST00000597781 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
SMIM7-215ENST00000597781 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
SMIM7-215ENST00000597781 CUL7Q14999 1698 aa12.64□□□□□ -0.39
SMIM7-215ENST00000597781 NUP160Q12769 1436 aa12.62□□□□□ -0.39
SMIM7-215ENST00000597781 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
SMIM7-215ENST00000597781 CHD1O14646 1710 aa12.57□□□□□ -0.4
SMIM7-215ENST00000597781 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms