RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-208ENST00000597656 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
KHSRP-208ENST00000597656 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
KHSRP-208ENST00000597656 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
KHSRP-208ENST00000597656 ABCC9O60706 1549 aa17.47■□□□□ 0.39
KHSRP-208ENST00000597656 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
KHSRP-208ENST00000597656 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
KHSRP-208ENST00000597656 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
KHSRP-208ENST00000597656 NACADO15069 1562 aa16.61■□□□□ 0.25
KHSRP-208ENST00000597656 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
KHSRP-208ENST00000597656 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
KHSRP-208ENST00000597656 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
KHSRP-208ENST00000597656 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
KHSRP-208ENST00000597656 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
KHSRP-208ENST00000597656 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.175e-7■□□□□ 8.6
KHSRP-208ENST00000597656 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
KHSRP-208ENST00000597656 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
KHSRP-208ENST00000597656 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
KHSRP-208ENST00000597656 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
KHSRP-208ENST00000597656 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
KHSRP-208ENST00000597656 CUX2O14529 1486 aa15.7■□□□□ 0.1
KHSRP-208ENST00000597656 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
KHSRP-208ENST00000597656 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
KHSRP-208ENST00000597656 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
KHSRP-208ENST00000597656 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
KHSRP-208ENST00000597656 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
KHSRP-208ENST00000597656 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
KHSRP-208ENST00000597656 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
KHSRP-208ENST00000597656 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
KHSRP-208ENST00000597656 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
KHSRP-208ENST00000597656 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
KHSRP-208ENST00000597656 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
KHSRP-208ENST00000597656 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
KHSRP-208ENST00000597656 WIZO95785 1651 aa15.25■□□□□ 0.03
KHSRP-208ENST00000597656 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
KHSRP-208ENST00000597656 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
KHSRP-208ENST00000597656 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
KHSRP-208ENST00000597656 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
KHSRP-208ENST00000597656 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
KHSRP-208ENST00000597656 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
KHSRP-208ENST00000597656 NESP48681 1621 aa14.94□□□□□ -0.02
KHSRP-208ENST00000597656 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
KHSRP-208ENST00000597656 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
KHSRP-208ENST00000597656 CFTRP13569 1480 aa14.87□□□□□ -0.03
KHSRP-208ENST00000597656 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
KHSRP-208ENST00000597656 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
KHSRP-208ENST00000597656 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
KHSRP-208ENST00000597656 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
KHSRP-208ENST00000597656 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
KHSRP-208ENST00000597656 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
KHSRP-208ENST00000597656 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
KHSRP-208ENST00000597656 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
KHSRP-208ENST00000597656 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
KHSRP-208ENST00000597656 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
KHSRP-208ENST00000597656 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
KHSRP-208ENST00000597656 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
KHSRP-208ENST00000597656 WDR62O43379 1518 aa14.57□□□□□ -0.08
KHSRP-208ENST00000597656 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
KHSRP-208ENST00000597656 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
KHSRP-208ENST00000597656 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
KHSRP-208ENST00000597656 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
KHSRP-208ENST00000597656 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
KHSRP-208ENST00000597656 CUX1P39880 1505 aa14.47□□□□□ -0.09
KHSRP-208ENST00000597656 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
KHSRP-208ENST00000597656 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
KHSRP-208ENST00000597656 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
KHSRP-208ENST00000597656 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
KHSRP-208ENST00000597656 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
KHSRP-208ENST00000597656 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
KHSRP-208ENST00000597656 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
KHSRP-208ENST00000597656 SOCS7O14512 581 aa14.37□□□□□ -0.11
KHSRP-208ENST00000597656 SOGA1O94964 1423 aa14.37□□□□□ -0.11
KHSRP-208ENST00000597656 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
KHSRP-208ENST00000597656 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
KHSRP-208ENST00000597656 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
KHSRP-208ENST00000597656 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
KHSRP-208ENST00000597656 CHIC1Q5VXU3 224 aa14.31□□□□□ -0.12
KHSRP-208ENST00000597656 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
KHSRP-208ENST00000597656 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
KHSRP-208ENST00000597656 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.122e-6■□□□□ 10.2
KHSRP-208ENST00000597656 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
KHSRP-208ENST00000597656 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
KHSRP-208ENST00000597656 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
KHSRP-208ENST00000597656 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
KHSRP-208ENST00000597656 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
KHSRP-208ENST00000597656 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
KHSRP-208ENST00000597656 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
KHSRP-208ENST00000597656 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
KHSRP-208ENST00000597656 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
KHSRP-208ENST00000597656 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
KHSRP-208ENST00000597656 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
KHSRP-208ENST00000597656 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
KHSRP-208ENST00000597656 IGF1RP08069 1367 aa14.09□□□□□ -0.15
KHSRP-208ENST00000597656 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
KHSRP-208ENST00000597656 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
KHSRP-208ENST00000597656 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
KHSRP-208ENST00000597656 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
KHSRP-208ENST00000597656 FBLN2P98095 1184 aa14.06□□□□□ -0.16
KHSRP-208ENST00000597656 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
KHSRP-208ENST00000597656 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
KHSRP-208ENST00000597656 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms