RNA–Protein interactions for RNA: ENST00000597075.1

COLGALT1-203, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-203ENST00000597075 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
COLGALT1-203ENST00000597075 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
COLGALT1-203ENST00000597075 ABCC9O60706 1549 aa34.53■■■■□ 3.12
COLGALT1-203ENST00000597075 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
COLGALT1-203ENST00000597075 ZCCHC6Q5VYS8 1495 aaKnown RBP33.35■■■□□ 2.93
COLGALT1-203ENST00000597075 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.88
COLGALT1-203ENST00000597075 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
COLGALT1-203ENST00000597075 NACADO15069 1562 aa32.96■■■□□ 2.87
COLGALT1-203ENST00000597075 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
COLGALT1-203ENST00000597075 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
COLGALT1-203ENST00000597075 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
COLGALT1-203ENST00000597075 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
COLGALT1-203ENST00000597075 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
COLGALT1-203ENST00000597075 DNAJC5BQ9UF47 199 aa31.76■■■□□ 2.67
COLGALT1-203ENST00000597075 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.67
COLGALT1-203ENST00000597075 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
COLGALT1-203ENST00000597075 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
COLGALT1-203ENST00000597075 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
COLGALT1-203ENST00000597075 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
COLGALT1-203ENST00000597075 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
COLGALT1-203ENST00000597075 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
COLGALT1-203ENST00000597075 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
COLGALT1-203ENST00000597075 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
COLGALT1-203ENST00000597075 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
COLGALT1-203ENST00000597075 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
COLGALT1-203ENST00000597075 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
COLGALT1-203ENST00000597075 WIZO95785 1651 aa30.35■■■□□ 2.45
COLGALT1-203ENST00000597075 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
COLGALT1-203ENST00000597075 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
COLGALT1-203ENST00000597075 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
COLGALT1-203ENST00000597075 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
COLGALT1-203ENST00000597075 NESP48681 1621 aa29.86■■■□□ 2.37
COLGALT1-203ENST00000597075 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
COLGALT1-203ENST00000597075 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
COLGALT1-203ENST00000597075 LAMC3Q9Y6N6 1575 aa29.64■■■□□ 2.33
COLGALT1-203ENST00000597075 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
COLGALT1-203ENST00000597075 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
COLGALT1-203ENST00000597075 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
COLGALT1-203ENST00000597075 CFTRP13569 1480 aa29.36■■■□□ 2.29
COLGALT1-203ENST00000597075 CUX2O14529 1486 aa29.29■■■□□ 2.28
COLGALT1-203ENST00000597075 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
COLGALT1-203ENST00000597075 FANCD2Q9BXW9 1451 aa29.28■■■□□ 2.28
COLGALT1-203ENST00000597075 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
COLGALT1-203ENST00000597075 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
COLGALT1-203ENST00000597075 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
COLGALT1-203ENST00000597075 WDR62O43379 1518 aa29.04■■■□□ 2.24
COLGALT1-203ENST00000597075 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
COLGALT1-203ENST00000597075 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
COLGALT1-203ENST00000597075 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
COLGALT1-203ENST00000597075 WRNQ14191 1432 aaPredicted RBP eCLIP28.83■■■□□ 2.21
COLGALT1-203ENST00000597075 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
COLGALT1-203ENST00000597075 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
COLGALT1-203ENST00000597075 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
COLGALT1-203ENST00000597075 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
COLGALT1-203ENST00000597075 CUX1P39880 1505 aa28.72■■■□□ 2.19
COLGALT1-203ENST00000597075 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
COLGALT1-203ENST00000597075 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
COLGALT1-203ENST00000597075 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
COLGALT1-203ENST00000597075 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
COLGALT1-203ENST00000597075 ZNF608Q9ULD9 1512 aaPredicted RBP28.54■■■□□ 2.16
COLGALT1-203ENST00000597075 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
COLGALT1-203ENST00000597075 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
COLGALT1-203ENST00000597075 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
COLGALT1-203ENST00000597075 SOGA1O94964 1423 aa28.49■■■□□ 2.15
COLGALT1-203ENST00000597075 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
COLGALT1-203ENST00000597075 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.141e-8■■■■□ 22.2
COLGALT1-203ENST00000597075 TDRD9Q8NDG6 1382 aaKnown RBP28.38■■■□□ 2.13
COLGALT1-203ENST00000597075 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
COLGALT1-203ENST00000597075 ABCA10Q8WWZ4 1543 aa28.29■■■□□ 2.12
COLGALT1-203ENST00000597075 EEA1Q15075 1411 aa28.26■■■□□ 2.11
COLGALT1-203ENST00000597075 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
COLGALT1-203ENST00000597075 FBLN2P98095 1184 aa28.23■■■□□ 2.11
COLGALT1-203ENST00000597075 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
COLGALT1-203ENST00000597075 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
COLGALT1-203ENST00000597075 GAPVD1Q14C86 1478 aa28.13■■■□□ 2.09
COLGALT1-203ENST00000597075 RUSC2Q8N2Y8 1516 aa28.12■■■□□ 2.09
COLGALT1-203ENST00000597075 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
COLGALT1-203ENST00000597075 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
COLGALT1-203ENST00000597075 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
COLGALT1-203ENST00000597075 CHD1O14646 1710 aa28.09■■■□□ 2.09
COLGALT1-203ENST00000597075 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
COLGALT1-203ENST00000597075 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
COLGALT1-203ENST00000597075 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
COLGALT1-203ENST00000597075 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
COLGALT1-203ENST00000597075 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
COLGALT1-203ENST00000597075 IGF1RP08069 1367 aa27.97■■■□□ 2.07
COLGALT1-203ENST00000597075 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
COLGALT1-203ENST00000597075 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
COLGALT1-203ENST00000597075 PRXQ9BXM0 1461 aa27.88■■■□□ 2.05
COLGALT1-203ENST00000597075 CUL7Q14999 1698 aa27.87■■■□□ 2.05
COLGALT1-203ENST00000597075 KIF21BO75037 1637 aa27.87■■■□□ 2.05
COLGALT1-203ENST00000597075 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
COLGALT1-203ENST00000597075 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
COLGALT1-203ENST00000597075 FHAD1B1AJZ9 1412 aa27.76■■■□□ 2.04
COLGALT1-203ENST00000597075 RAPGEF2Q9Y4G8 1499 aa27.75■■■□□ 2.03
COLGALT1-203ENST00000597075 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
COLGALT1-203ENST00000597075 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
COLGALT1-203ENST00000597075 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
COLGALT1-203ENST00000597075 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
COLGALT1-203ENST00000597075 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms