RNA–Protein interactions for RNA: ENST00000596648.1

POLD1-208, Transcript of DNA polymerase delta 1, catalytic subunit, humanhuman

TSL 5

Gene POLD1, Length 1,048 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1-208ENST00000596648 NISCHQ9Y2I1 1504 aa46.77■■■■■ 5.08
POLD1-208ENST00000596648 ABCC9O60706 1549 aa42.68■■■■■ 4.42
POLD1-208ENST00000596648 CCDC180Q9P1Z9 1646 aa42.08■■■■■ 4.33
POLD1-208ENST00000596648 DNAJC5BQ9UF47 199 aa40.68■■■■■ 4.1
POLD1-208ENST00000596648 RB1CC1Q8TDY2 1594 aa40.27■■■■■ 4.04
POLD1-208ENST00000596648 NACADO15069 1562 aa39.85■■■■□ 3.97
POLD1-208ENST00000596648 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
POLD1-208ENST00000596648 PABPN1Q86U42 306 aaKnown RBP eCLIP39.63■■■■□ 3.933e-6■■■■□ 23.3
POLD1-208ENST00000596648 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
POLD1-208ENST00000596648 BICRAQ9NZM4 1560 aa39.31■■■■□ 3.88
POLD1-208ENST00000596648 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
POLD1-208ENST00000596648 ZCCHC6Q5VYS8 1495 aaKnown RBP38.84■■■■□ 3.81
POLD1-208ENST00000596648 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
POLD1-208ENST00000596648 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
POLD1-208ENST00000596648 CECR2Q9BXF3 1484 aa38.46■■■■□ 3.75
POLD1-208ENST00000596648 SHROOM4Q9ULL8 1493 aa38.46■■■■□ 3.75
POLD1-208ENST00000596648 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
POLD1-208ENST00000596648 EIF4G1Q04637 1599 aaKnown RBP38.3■■■■□ 3.72
POLD1-208ENST00000596648 DNAJC5Q9H3Z4 198 aa37.62■■■■□ 3.61
POLD1-208ENST00000596648 CUX2O14529 1486 aa36.93■■■■□ 3.5
POLD1-208ENST00000596648 NCAPD3P42695 1498 aa36.82■■■■□ 3.48
POLD1-208ENST00000596648 ERCC6Q03468 1493 aa36.77■■■■□ 3.48
POLD1-208ENST00000596648 ATAD2BQ9ULI0 1458 aa36.66■■■■□ 3.46
POLD1-208ENST00000596648 NESP48681 1621 aa36.56■■■■□ 3.44
POLD1-208ENST00000596648 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
POLD1-208ENST00000596648 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
POLD1-208ENST00000596648 SMARCA2P51531 1590 aa36.45■■■■□ 3.43
POLD1-208ENST00000596648 THOC2Q8NI27 1593 aaKnown RBP36.31■■■■□ 3.4
POLD1-208ENST00000596648 BAZ1AQ9NRL2 1556 aaPredicted RBP36.3■■■■□ 3.4
POLD1-208ENST00000596648 BAZ1BQ9UIG0 1483 aaKnown RBP36.22■■■■□ 3.39
POLD1-208ENST00000596648 PEG3Q9GZU2 1588 aa36.13■■■■□ 3.37
POLD1-208ENST00000596648 KIF21AQ7Z4S6 1674 aa36.11■■■■□ 3.37
POLD1-208ENST00000596648 LAMC3Q9Y6N6 1575 aa36.08■■■■□ 3.37
POLD1-208ENST00000596648 MROH2BQ7Z745 1585 aa36.04■■■■□ 3.36
POLD1-208ENST00000596648 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
POLD1-208ENST00000596648 TRIM41Q8WV44 630 aa35.72■■■■□ 3.31
POLD1-208ENST00000596648 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
POLD1-208ENST00000596648 WIZO95785 1651 aa35.62■■■■□ 3.29
POLD1-208ENST00000596648 MRC2Q9UBG0 1479 aa35.61■■■■□ 3.29
POLD1-208ENST00000596648 WDR62O43379 1518 aa35.6■■■■□ 3.29
POLD1-208ENST00000596648 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
POLD1-208ENST00000596648 CEP164Q9UPV0 1460 aa35.34■■■■□ 3.25
POLD1-208ENST00000596648 FANCD2Q9BXW9 1451 aa35.28■■■■□ 3.24
POLD1-208ENST00000596648 TOP2AP11388 1531 aaKnown RBP35.21■■■■□ 3.23
POLD1-208ENST00000596648 CFTRP13569 1480 aa35.15■■■■□ 3.22
POLD1-208ENST00000596648 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
POLD1-208ENST00000596648 OSCARQ8IYS5 282 aa35.09■■■■□ 3.21
POLD1-208ENST00000596648 RIMBP3CA6NJZ7 1639 aa34.9■■■■□ 3.18
POLD1-208ENST00000596648 RIMBP3BA6NNM3 1639 aa34.9■■■■□ 3.18
POLD1-208ENST00000596648 RIMBP3Q9UFD9 1639 aa34.9■■■■□ 3.18
POLD1-208ENST00000596648 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
POLD1-208ENST00000596648 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
POLD1-208ENST00000596648 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
POLD1-208ENST00000596648 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
POLD1-208ENST00000596648 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
POLD1-208ENST00000596648 TOPBP1Q92547 1522 aa34.58■■■■□ 3.13
POLD1-208ENST00000596648 EIF4G3O43432 1585 aaKnown RBP34.54■■■■□ 3.12
POLD1-208ENST00000596648 CHD1O14646 1710 aa34.47■■■■□ 3.11
POLD1-208ENST00000596648 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
POLD1-208ENST00000596648 CYB5RLQ6IPT4 315 aa34.38■■■■□ 3.09
POLD1-208ENST00000596648 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
POLD1-208ENST00000596648 AQRO60306 1485 aaKnown RBP eCLIP34.34■■■■□ 3.091e-6■■■□□ 16.3
POLD1-208ENST00000596648 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
POLD1-208ENST00000596648 ABCC8Q09428 1581 aa34.31■■■■□ 3.08
POLD1-208ENST00000596648 POLA1P09884 1462 aaPredicted RBP34.19■■■■□ 3.06
POLD1-208ENST00000596648 TRHP20396 242 aaPredicted RBP34.12■■■■□ 3.05
POLD1-208ENST00000596648 FBLN2P98095 1184 aa34.12■■■■□ 3.05
POLD1-208ENST00000596648 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
POLD1-208ENST00000596648 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
POLD1-208ENST00000596648 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
POLD1-208ENST00000596648 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
POLD1-208ENST00000596648 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
POLD1-208ENST00000596648 SOGA1O94964 1423 aa33.95■■■■□ 3.02
POLD1-208ENST00000596648 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
POLD1-208ENST00000596648 CUX1P39880 1505 aa33.85■■■■□ 3.01
POLD1-208ENST00000596648 WDR97A6NE52 1622 aa33.83■■■■□ 3.01
POLD1-208ENST00000596648 SYNJ1O43426 1573 aa33.81■■■■□ 3
POLD1-208ENST00000596648 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
POLD1-208ENST00000596648 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
POLD1-208ENST00000596648 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
POLD1-208ENST00000596648 PBRM1Q86U86 1689 aa33.7■■■□□ 2.99
POLD1-208ENST00000596648 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
POLD1-208ENST00000596648 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
POLD1-208ENST00000596648 ABCA5Q8WWZ7 1642 aa33.52■■■□□ 2.96
POLD1-208ENST00000596648 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.96
POLD1-208ENST00000596648 AEBP2Q6ZN18 517 aaPredicted RBP33.49■■■□□ 2.95
POLD1-208ENST00000596648 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
POLD1-208ENST00000596648 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
POLD1-208ENST00000596648 TOP2BQ02880 1626 aa33.39■■■□□ 2.93
POLD1-208ENST00000596648 WRNQ14191 1432 aaPredicted RBP eCLIP33.37■■■□□ 2.93
POLD1-208ENST00000596648 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
POLD1-208ENST00000596648 GRIN2AQ12879 1464 aa33.32■■■□□ 2.92
POLD1-208ENST00000596648 ADAMTS12P58397 1594 aa33.29■■■□□ 2.92
POLD1-208ENST00000596648 NUP160Q12769 1436 aa33.25■■■□□ 2.91
POLD1-208ENST00000596648 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
POLD1-208ENST00000596648 KIF13AQ9H1H9 1805 aa33.23■■■□□ 2.91
POLD1-208ENST00000596648 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
POLD1-208ENST00000596648 ERICH3Q5RHP9 1530 aa33.06■■■□□ 2.88
POLD1-208ENST00000596648 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
POLD1-208ENST00000596648 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms