RNA–Protein interactions for RNA: ENST00000596518.1

SYMPK-206, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-206ENST00000596518 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
SYMPK-206ENST00000596518 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
SYMPK-206ENST00000596518 ABCC9O60706 1549 aa22.11■■□□□ 1.13
SYMPK-206ENST00000596518 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
SYMPK-206ENST00000596518 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
SYMPK-206ENST00000596518 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
SYMPK-206ENST00000596518 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
SYMPK-206ENST00000596518 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
SYMPK-206ENST00000596518 NACADO15069 1562 aa21.27■□□□□ 0.99
SYMPK-206ENST00000596518 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
SYMPK-206ENST00000596518 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
SYMPK-206ENST00000596518 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
SYMPK-206ENST00000596518 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
SYMPK-206ENST00000596518 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
SYMPK-206ENST00000596518 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
SYMPK-206ENST00000596518 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
SYMPK-206ENST00000596518 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
SYMPK-206ENST00000596518 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
SYMPK-206ENST00000596518 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
SYMPK-206ENST00000596518 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
SYMPK-206ENST00000596518 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
SYMPK-206ENST00000596518 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
SYMPK-206ENST00000596518 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
SYMPK-206ENST00000596518 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
SYMPK-206ENST00000596518 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
SYMPK-206ENST00000596518 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
SYMPK-206ENST00000596518 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
SYMPK-206ENST00000596518 WIZO95785 1651 aa19.56■□□□□ 0.72
SYMPK-206ENST00000596518 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
SYMPK-206ENST00000596518 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
SYMPK-206ENST00000596518 RSF1Q96T23 1441 aaPredicted RBP19.49■□□□□ 0.71
SYMPK-206ENST00000596518 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
SYMPK-206ENST00000596518 NESP48681 1621 aa19.17■□□□□ 0.66
SYMPK-206ENST00000596518 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
SYMPK-206ENST00000596518 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
SYMPK-206ENST00000596518 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
SYMPK-206ENST00000596518 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
SYMPK-206ENST00000596518 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
SYMPK-206ENST00000596518 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
SYMPK-206ENST00000596518 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
SYMPK-206ENST00000596518 CFTRP13569 1480 aa18.95■□□□□ 0.62
SYMPK-206ENST00000596518 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
SYMPK-206ENST00000596518 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
SYMPK-206ENST00000596518 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
SYMPK-206ENST00000596518 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
SYMPK-206ENST00000596518 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
SYMPK-206ENST00000596518 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
SYMPK-206ENST00000596518 CUX2O14529 1486 aa18.74■□□□□ 0.59
SYMPK-206ENST00000596518 WDR62O43379 1518 aa18.7■□□□□ 0.58
SYMPK-206ENST00000596518 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
SYMPK-206ENST00000596518 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SYMPK-206ENST00000596518 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
SYMPK-206ENST00000596518 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
SYMPK-206ENST00000596518 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
SYMPK-206ENST00000596518 CUX1P39880 1505 aa18.49■□□□□ 0.55
SYMPK-206ENST00000596518 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-206ENST00000596518 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
SYMPK-206ENST00000596518 IFT140Q96RY7 1462 aa18.39■□□□□ 0.54
SYMPK-206ENST00000596518 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
SYMPK-206ENST00000596518 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
SYMPK-206ENST00000596518 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
SYMPK-206ENST00000596518 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
SYMPK-206ENST00000596518 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
SYMPK-206ENST00000596518 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
SYMPK-206ENST00000596518 ZNF608Q9ULD9 1512 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-206ENST00000596518 SOGA1O94964 1423 aa18.33■□□□□ 0.53
SYMPK-206ENST00000596518 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
SYMPK-206ENST00000596518 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
SYMPK-206ENST00000596518 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYMPK-206ENST00000596518 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
SYMPK-206ENST00000596518 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
SYMPK-206ENST00000596518 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
SYMPK-206ENST00000596518 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
SYMPK-206ENST00000596518 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
SYMPK-206ENST00000596518 CHD1O14646 1710 aa18.11■□□□□ 0.49
SYMPK-206ENST00000596518 GRIN2BQ13224 1484 aa18.1■□□□□ 0.49
SYMPK-206ENST00000596518 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
SYMPK-206ENST00000596518 MAGI1Q96QZ7 1491 aaPredicted RBP18.03■□□□□ 0.48
SYMPK-206ENST00000596518 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
SYMPK-206ENST00000596518 FBLN2P98095 1184 aa18.02■□□□□ 0.48
SYMPK-206ENST00000596518 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
SYMPK-206ENST00000596518 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
SYMPK-206ENST00000596518 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
SYMPK-206ENST00000596518 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
SYMPK-206ENST00000596518 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
SYMPK-206ENST00000596518 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
SYMPK-206ENST00000596518 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
SYMPK-206ENST00000596518 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
SYMPK-206ENST00000596518 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
SYMPK-206ENST00000596518 CUL7Q14999 1698 aa17.89■□□□□ 0.45
SYMPK-206ENST00000596518 IGF1RP08069 1367 aa17.88■□□□□ 0.45
SYMPK-206ENST00000596518 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
SYMPK-206ENST00000596518 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
SYMPK-206ENST00000596518 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
SYMPK-206ENST00000596518 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
SYMPK-206ENST00000596518 NUP160Q12769 1436 aa17.77■□□□□ 0.44
SYMPK-206ENST00000596518 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
SYMPK-206ENST00000596518 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
SYMPK-206ENST00000596518 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
SYMPK-206ENST00000596518 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms