RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-215ENST00000596351 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
LTBP4-215ENST00000596351 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
LTBP4-215ENST00000596351 ABCC9O60706 1549 aa27.07■■□□□ 1.92
LTBP4-215ENST00000596351 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
LTBP4-215ENST00000596351 NACADO15069 1562 aa25.61■■□□□ 1.69
LTBP4-215ENST00000596351 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
LTBP4-215ENST00000596351 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
LTBP4-215ENST00000596351 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
LTBP4-215ENST00000596351 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
LTBP4-215ENST00000596351 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
LTBP4-215ENST00000596351 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
LTBP4-215ENST00000596351 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
LTBP4-215ENST00000596351 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
LTBP4-215ENST00000596351 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
LTBP4-215ENST00000596351 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
LTBP4-215ENST00000596351 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
LTBP4-215ENST00000596351 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
LTBP4-215ENST00000596351 CECR2Q9BXF3 1484 aa24.34■■□□□ 1.49
LTBP4-215ENST00000596351 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
LTBP4-215ENST00000596351 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
LTBP4-215ENST00000596351 ATAD2BQ9ULI0 1458 aa23.59■■□□□ 1.37
LTBP4-215ENST00000596351 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
LTBP4-215ENST00000596351 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
LTBP4-215ENST00000596351 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
LTBP4-215ENST00000596351 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
LTBP4-215ENST00000596351 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
LTBP4-215ENST00000596351 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
LTBP4-215ENST00000596351 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
LTBP4-215ENST00000596351 NESP48681 1621 aa23.3■■□□□ 1.32
LTBP4-215ENST00000596351 CUX2O14529 1486 aa23.23■■□□□ 1.31
LTBP4-215ENST00000596351 WIZO95785 1651 aa23.14■■□□□ 1.29
LTBP4-215ENST00000596351 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
LTBP4-215ENST00000596351 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
LTBP4-215ENST00000596351 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
LTBP4-215ENST00000596351 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
LTBP4-215ENST00000596351 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
LTBP4-215ENST00000596351 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
LTBP4-215ENST00000596351 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-215ENST00000596351 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
LTBP4-215ENST00000596351 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
LTBP4-215ENST00000596351 WDR62O43379 1518 aa22.72■■□□□ 1.23
LTBP4-215ENST00000596351 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
LTBP4-215ENST00000596351 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
LTBP4-215ENST00000596351 CFTRP13569 1480 aa22.67■■□□□ 1.22
LTBP4-215ENST00000596351 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
LTBP4-215ENST00000596351 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
LTBP4-215ENST00000596351 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.19
LTBP4-215ENST00000596351 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
LTBP4-215ENST00000596351 ZNF608Q9ULD9 1512 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-215ENST00000596351 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
LTBP4-215ENST00000596351 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
LTBP4-215ENST00000596351 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
LTBP4-215ENST00000596351 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
LTBP4-215ENST00000596351 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.13
LTBP4-215ENST00000596351 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
LTBP4-215ENST00000596351 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
LTBP4-215ENST00000596351 POLA1P09884 1462 aaPredicted RBP22.05■■□□□ 1.12
LTBP4-215ENST00000596351 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.111e-8■■□□□ 14.1
LTBP4-215ENST00000596351 CHD1O14646 1710 aa22■■□□□ 1.11
LTBP4-215ENST00000596351 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
LTBP4-215ENST00000596351 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
LTBP4-215ENST00000596351 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
LTBP4-215ENST00000596351 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
LTBP4-215ENST00000596351 CUX1P39880 1505 aa21.96■■□□□ 1.11
LTBP4-215ENST00000596351 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
LTBP4-215ENST00000596351 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
LTBP4-215ENST00000596351 SOGA1O94964 1423 aa21.91■■□□□ 1.1
LTBP4-215ENST00000596351 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
LTBP4-215ENST00000596351 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
LTBP4-215ENST00000596351 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
LTBP4-215ENST00000596351 FBLN2P98095 1184 aa21.82■■□□□ 1.08
LTBP4-215ENST00000596351 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
LTBP4-215ENST00000596351 PBRM1Q86U86 1689 aa21.76■■□□□ 1.07
LTBP4-215ENST00000596351 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
LTBP4-215ENST00000596351 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-215ENST00000596351 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
LTBP4-215ENST00000596351 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
LTBP4-215ENST00000596351 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
LTBP4-215ENST00000596351 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
LTBP4-215ENST00000596351 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
LTBP4-215ENST00000596351 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
LTBP4-215ENST00000596351 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
LTBP4-215ENST00000596351 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
LTBP4-215ENST00000596351 SYNJ2O15056 1496 aa21.64■■□□□ 1.06
LTBP4-215ENST00000596351 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
LTBP4-215ENST00000596351 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
LTBP4-215ENST00000596351 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
LTBP4-215ENST00000596351 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
LTBP4-215ENST00000596351 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
LTBP4-215ENST00000596351 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
LTBP4-215ENST00000596351 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.02
LTBP4-215ENST00000596351 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
LTBP4-215ENST00000596351 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
LTBP4-215ENST00000596351 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
LTBP4-215ENST00000596351 NUP160Q12769 1436 aa21.38■■□□□ 1.01
LTBP4-215ENST00000596351 SHROOM2Q13796 1616 aa21.32■■□□□ 1
LTBP4-215ENST00000596351 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
LTBP4-215ENST00000596351 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
LTBP4-215ENST00000596351 CUL7Q14999 1698 aa21.15■□□□□ 0.98
LTBP4-215ENST00000596351 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms