RNA–Protein interactions for RNA: ENST00000596238.1

C3-207, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-207ENST00000596238 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
C3-207ENST00000596238 ABCC9O60706 1549 aa18.42■□□□□ 0.54
C3-207ENST00000596238 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
C3-207ENST00000596238 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
C3-207ENST00000596238 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
C3-207ENST00000596238 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
C3-207ENST00000596238 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
C3-207ENST00000596238 NACADO15069 1562 aa17■□□□□ 0.31
C3-207ENST00000596238 DNAJC5Q9H3Z4 198 aa16.85■□□□□ 0.29
C3-207ENST00000596238 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
C3-207ENST00000596238 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
C3-207ENST00000596238 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
C3-207ENST00000596238 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
C3-207ENST00000596238 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
C3-207ENST00000596238 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
C3-207ENST00000596238 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
C3-207ENST00000596238 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
C3-207ENST00000596238 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
C3-207ENST00000596238 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
C3-207ENST00000596238 CUX2O14529 1486 aa16.09■□□□□ 0.17
C3-207ENST00000596238 ERCC6Q03468 1493 aa15.96■□□□□ 0.14
C3-207ENST00000596238 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
C3-207ENST00000596238 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
C3-207ENST00000596238 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
C3-207ENST00000596238 NESP48681 1621 aa15.65■□□□□ 0.1
C3-207ENST00000596238 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
C3-207ENST00000596238 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
C3-207ENST00000596238 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
C3-207ENST00000596238 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
C3-207ENST00000596238 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
C3-207ENST00000596238 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
C3-207ENST00000596238 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
C3-207ENST00000596238 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
C3-207ENST00000596238 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
C3-207ENST00000596238 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
C3-207ENST00000596238 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
C3-207ENST00000596238 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
C3-207ENST00000596238 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
C3-207ENST00000596238 WDR62O43379 1518 aa15.22■□□□□ 0.03
C3-207ENST00000596238 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
C3-207ENST00000596238 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
C3-207ENST00000596238 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
C3-207ENST00000596238 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
C3-207ENST00000596238 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
C3-207ENST00000596238 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
C3-207ENST00000596238 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
C3-207ENST00000596238 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
C3-207ENST00000596238 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
C3-207ENST00000596238 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
C3-207ENST00000596238 CFTRP13569 1480 aa14.98□□□□□ -0.01
C3-207ENST00000596238 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
C3-207ENST00000596238 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
C3-207ENST00000596238 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
C3-207ENST00000596238 FBLN2P98095 1184 aa14.84□□□□□ -0.03
C3-207ENST00000596238 WIZO95785 1651 aa14.83□□□□□ -0.04
C3-207ENST00000596238 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
C3-207ENST00000596238 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.04
C3-207ENST00000596238 AQRO60306 1485 aaKnown RBP eCLIP14.74□□□□□ -0.053e-16■■■■■ 78.5
C3-207ENST00000596238 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
C3-207ENST00000596238 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
C3-207ENST00000596238 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
C3-207ENST00000596238 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
C3-207ENST00000596238 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
C3-207ENST00000596238 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
C3-207ENST00000596238 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
C3-207ENST00000596238 SOGA1O94964 1423 aa14.55□□□□□ -0.08
C3-207ENST00000596238 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
C3-207ENST00000596238 CHD1O14646 1710 aa14.54□□□□□ -0.08
C3-207ENST00000596238 TARBP1Q13395 1621 aaKnown RBP14.53□□□□□ -0.08
C3-207ENST00000596238 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
C3-207ENST00000596238 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
C3-207ENST00000596238 CLASP1Q7Z460 1538 aa14.5□□□□□ -0.09
C3-207ENST00000596238 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
C3-207ENST00000596238 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
C3-207ENST00000596238 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
C3-207ENST00000596238 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
C3-207ENST00000596238 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
C3-207ENST00000596238 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
C3-207ENST00000596238 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
C3-207ENST00000596238 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
C3-207ENST00000596238 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
C3-207ENST00000596238 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
C3-207ENST00000596238 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
C3-207ENST00000596238 FAM69CQ0P6D2 419 aa14.31□□□□□ -0.12
C3-207ENST00000596238 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
C3-207ENST00000596238 ERCC6L2Q5T890 1561 aa14.24□□□□□ -0.13
C3-207ENST00000596238 CUX1P39880 1505 aa14.23□□□□□ -0.13
C3-207ENST00000596238 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
C3-207ENST00000596238 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
C3-207ENST00000596238 NUP160Q12769 1436 aa14.2□□□□□ -0.14
C3-207ENST00000596238 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
C3-207ENST00000596238 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
C3-207ENST00000596238 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
C3-207ENST00000596238 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
C3-207ENST00000596238 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
C3-207ENST00000596238 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
C3-207ENST00000596238 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
C3-207ENST00000596238 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
C3-207ENST00000596238 KIF13AQ9H1H9 1805 aa14.07□□□□□ -0.16
C3-207ENST00000596238 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms