RNA–Protein interactions for RNA: ENST00000596070.1

CLPP-203, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 5

Gene CLPP, Length 1,346 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-203ENST00000596070 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
CLPP-203ENST00000596070 CCDC180Q9P1Z9 1646 aa35.89■■■■□ 3.34
CLPP-203ENST00000596070 ABCC9O60706 1549 aa35.71■■■■□ 3.31
CLPP-203ENST00000596070 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
CLPP-203ENST00000596070 NACADO15069 1562 aa33.78■■■■□ 3
CLPP-203ENST00000596070 DCAF8L2P0C7V8 631 aa33.62■■■□□ 2.97
CLPP-203ENST00000596070 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CLPP-203ENST00000596070 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
CLPP-203ENST00000596070 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
CLPP-203ENST00000596070 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
CLPP-203ENST00000596070 ZCCHC6Q5VYS8 1495 aaKnown RBP33.15■■■□□ 2.9
CLPP-203ENST00000596070 BICRAQ9NZM4 1560 aa33.07■■■□□ 2.88
CLPP-203ENST00000596070 DCAF1Q9Y4B6 1507 aa32.94■■■□□ 2.86
CLPP-203ENST00000596070 SCRIBQ14160 1630 aa32.77■■■□□ 2.84
CLPP-203ENST00000596070 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
CLPP-203ENST00000596070 CC2D2AQ9P2K1 1620 aa32.3■■■□□ 2.76
CLPP-203ENST00000596070 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
CLPP-203ENST00000596070 CECR2Q9BXF3 1484 aa32.11■■■□□ 2.73
CLPP-203ENST00000596070 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
CLPP-203ENST00000596070 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
CLPP-203ENST00000596070 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
CLPP-203ENST00000596070 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
CLPP-203ENST00000596070 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
CLPP-203ENST00000596070 HMGXB3Q12766 1538 aa31■■■□□ 2.55
CLPP-203ENST00000596070 BAZ1BQ9UIG0 1483 aaKnown RBP30.85■■■□□ 2.53
CLPP-203ENST00000596070 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
CLPP-203ENST00000596070 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
CLPP-203ENST00000596070 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
CLPP-203ENST00000596070 NESP48681 1621 aa30.73■■■□□ 2.51
CLPP-203ENST00000596070 CUX2O14529 1486 aa30.64■■■□□ 2.5
CLPP-203ENST00000596070 WIZO95785 1651 aa30.55■■■□□ 2.48
CLPP-203ENST00000596070 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
CLPP-203ENST00000596070 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
CLPP-203ENST00000596070 THOC2Q8NI27 1593 aaKnown RBP30.44■■■□□ 2.46
CLPP-203ENST00000596070 DNAJC5Q9H3Z4 198 aa30.39■■■□□ 2.46
CLPP-203ENST00000596070 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
CLPP-203ENST00000596070 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
CLPP-203ENST00000596070 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
CLPP-203ENST00000596070 TOP2AP11388 1531 aaKnown RBP30.09■■■□□ 2.41
CLPP-203ENST00000596070 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
CLPP-203ENST00000596070 WDR62O43379 1518 aa29.98■■■□□ 2.39
CLPP-203ENST00000596070 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
CLPP-203ENST00000596070 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
CLPP-203ENST00000596070 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
CLPP-203ENST00000596070 CFTRP13569 1480 aa29.89■■■□□ 2.38
CLPP-203ENST00000596070 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
CLPP-203ENST00000596070 URB2Q14146 1524 aaKnown RBP29.69■■■□□ 2.34
CLPP-203ENST00000596070 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
CLPP-203ENST00000596070 DNMBPQ6XZF7 1577 aa29.32■■■□□ 2.28
CLPP-203ENST00000596070 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
CLPP-203ENST00000596070 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
CLPP-203ENST00000596070 TRIM41Q8WV44 630 aa29.24■■■□□ 2.27
CLPP-203ENST00000596070 EIF4G3O43432 1585 aaKnown RBP29.24■■■□□ 2.27
CLPP-203ENST00000596070 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
CLPP-203ENST00000596070 OSCARQ8IYS5 282 aa29.18■■■□□ 2.26
CLPP-203ENST00000596070 TARBP1Q13395 1621 aaKnown RBP29.16■■■□□ 2.26
CLPP-203ENST00000596070 CHD1O14646 1710 aa29.09■■■□□ 2.25
CLPP-203ENST00000596070 POLA1P09884 1462 aaPredicted RBP29.09■■■□□ 2.25
CLPP-203ENST00000596070 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.246e-7■■■□□ 19.1
CLPP-203ENST00000596070 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.24
CLPP-203ENST00000596070 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.24
CLPP-203ENST00000596070 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.24
CLPP-203ENST00000596070 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
CLPP-203ENST00000596070 CUX1P39880 1505 aa28.95■■■□□ 2.23
CLPP-203ENST00000596070 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.23
CLPP-203ENST00000596070 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
CLPP-203ENST00000596070 SOGA1O94964 1423 aa28.89■■■□□ 2.22
CLPP-203ENST00000596070 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
CLPP-203ENST00000596070 WDR97A6NE52 1622 aa28.86■■■□□ 2.21
CLPP-203ENST00000596070 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
CLPP-203ENST00000596070 FBLN2P98095 1184 aa28.79■■■□□ 2.2
CLPP-203ENST00000596070 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
CLPP-203ENST00000596070 PBRM1Q86U86 1689 aa28.78■■■□□ 2.2
CLPP-203ENST00000596070 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
CLPP-203ENST00000596070 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
CLPP-203ENST00000596070 ABCA5Q8WWZ7 1642 aa28.63■■■□□ 2.17
CLPP-203ENST00000596070 SYNJ1O43426 1573 aa28.6■■■□□ 2.17
CLPP-203ENST00000596070 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
CLPP-203ENST00000596070 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
CLPP-203ENST00000596070 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
CLPP-203ENST00000596070 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
CLPP-203ENST00000596070 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
CLPP-203ENST00000596070 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
CLPP-203ENST00000596070 CYB5RLQ6IPT4 315 aa28.55■■■□□ 2.16
CLPP-203ENST00000596070 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
CLPP-203ENST00000596070 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
CLPP-203ENST00000596070 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
CLPP-203ENST00000596070 ADAMTS12P58397 1594 aa28.42■■■□□ 2.14
CLPP-203ENST00000596070 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
CLPP-203ENST00000596070 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
CLPP-203ENST00000596070 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
CLPP-203ENST00000596070 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
CLPP-203ENST00000596070 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
CLPP-203ENST00000596070 FHAD1B1AJZ9 1412 aa28.2■■■□□ 2.1
CLPP-203ENST00000596070 NUP160Q12769 1436 aa28.18■■■□□ 2.1
CLPP-203ENST00000596070 SHROOM2Q13796 1616 aa28.14■■■□□ 2.1
CLPP-203ENST00000596070 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
CLPP-203ENST00000596070 CUL7Q14999 1698 aa27.94■■■□□ 2.06
CLPP-203ENST00000596070 PRG4Q92954 1404 aaPredicted RBP27.9■■■□□ 2.06
CLPP-203ENST00000596070 KIF27Q86VH2 1401 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 1339.7 ms